RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 IL22RA1Q8N6P7 574 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 ZNF366Q8N895 744 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 CLHC1Q8NHS4 586 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 MBOAT7Q96N66 472 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 QKIQ96PU8 341 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 CLCC1Q96S66 551 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 GPER1Q99527 375 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 CAB39LQ9H9S4 337 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 XPNPEP1Q9NQW7 623 aa9.68□□□□□ -0.86
CLTCL1-211ENST00000621271 EFCAB10A6NFE3 127 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 FSCN2O14926 492 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 NBNO60934 754 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CLEC3AO75596 197 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 ADH1BP00325 375 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 GNAZP19086 355 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 TPSB2P20231 275 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 EIF2B2P49770 351 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CLCN7P51798 805 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 USP46P62068 366 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 GPR17Q13304 367 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 TPSAB1Q15661 275 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 ABHD13Q7L211 337 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 PLD5Q8N7P1 536 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 TTLQ8NG68 377 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 EMID1Q96A84 441 aaPredicted RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 IGSF21Q96ID5 467 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 HIST1H2AAQ96QV6 131 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 IKZF4Q9H2S9 585 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 ACSS3Q9H6R3 686 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CCSER2Q9H7U1 834 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 PNO1Q9NRX1 252 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CALML5Q9NZT1 146 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 C19orf25Q9UFG5 118 aaPredicted RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 HMGXB4Q9UGU5 601 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SAMHD1Q9Y3Z3 626 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 TCAF1Q9Y4C2 921 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 NOX1Q9Y5S8 564 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 ILVBLA1L0T0 632 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 LRCH4O75427 683 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 LDOC1O95751 146 aaPredicted RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 PER3P56645 1201 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 ZNF730Q6ZMV8 503 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CMTM8Q8IZV2 173 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 TMEM145Q8NBT3 493 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 FAM13CQ8NE31 585 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SPATA22Q8NHS9 363 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 VANGL1Q8TAA9 524 aaPredicted RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 NCSTNQ92542 709 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 HAPLN3Q96S86 360 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 LDAHQ9H6V9 325 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SLCO1B3Q9NPD5 702 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SPAG4Q9NPE6 437 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CHRAC1Q9NRG0 131 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 IKZF3Q9UKT9 509 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 TRAF6Q9Y4K3 522 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 H0YGN5 161 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 DHX15O43143 795 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SIN3BO75182 1162 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 HSPA7P48741 367 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 NR1H2P55055 460 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 BLMHQ13867 455 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SOWAHAQ2M3V2 549 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 ARHGAP40Q5TG30 622 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CMC1Q7Z7K0 106 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 MAGEE2Q8TD90 523 aaPredicted RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 ZSCAN5AQ9BUG6 496 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 RIOK2Q9BVS4 552 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SERTAD3Q9UJW9 196 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 IKZF2Q9UKS7 526 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SNX10Q9Y5X0 201 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 C9IYK1 514 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 KLF8O95600 359 aaPredicted RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 HNRNPA1P09651 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 TNK2Q07912 1038 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SLC1A5Q15758 541 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 EML3Q32P44 896 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SULT1C3Q6IMI6 304 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 AAGABQ6PD74 315 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SPESP1Q6UW49 350 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 Q6ZVU0 165 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CUZD1Q86UP6 607 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 COX18Q8N8Q8 333 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 OR2AP1Q8NGE2 309 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 PTCD3Q96EY7 689 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CCDC28BQ9BUN5 200 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 C6orf62Q9GZU0 229 aaPredicted RBP9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 SERINC1Q9NRX5 453 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CMTM6Q9NX76 183 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 CYP8B1Q9UNU6 501 aa9.67□□□□□ -0.86
CLTCL1-211ENST00000621271 PLIN4Q96Q06 1357 aa9.66□□□□□ -0.86
CLTCL1-211ENST00000621271 MON2Q7Z3U7 1717 aa9.66□□□□□ -0.86
CLTCL1-211ENST00000621271 TCRBV9S1A1TA0A576 114 aa9.66□□□□□ -0.86
CLTCL1-211ENST00000621271 MED26O95402 600 aa9.66□□□□□ -0.86
CLTCL1-211ENST00000621271 CYB5AP00167 134 aa9.66□□□□□ -0.86
CLTCL1-211ENST00000621271 GOT2P00505 430 aaKnown RBP9.66□□□□□ -0.86
CLTCL1-211ENST00000621271 CCNA2P20248 432 aa9.66□□□□□ -0.86
CLTCL1-211ENST00000621271 TTKP33981 857 aa9.66□□□□□ -0.86
CLTCL1-211ENST00000621271 STAT5AP42229 794 aa9.66□□□□□ -0.86
CLTCL1-211ENST00000621271 TIGD2Q4W5G0 525 aa9.66□□□□□ -0.86
CLTCL1-211ENST00000621271 DDI2Q5TDH0 399 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms