RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 HSPA12AO43301 675 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 OR10H2O60403 315 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 KERAO60938 352 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 GNALP38405 381 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PRKCIP41743 596 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 HSDL1Q3SXM5 330 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SETMARQ53H47 684 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 KLHL26Q53HC5 615 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 GCNT6Q5T4J0 391 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PLPP4Q5VZY2 271 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 FRRS1Q6ZNA5 592 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 GPR142Q7Z601 462 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 FAM83AQ86UY5 434 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 OXR1Q8N573 874 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 METTL25Q8N6Q8 603 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 ANKFN1Q8N957 763 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 TERB2Q8NHR7 220 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SEMA4BQ9NPR2 832 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PLD2O14939 933 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 NR2C1P13056 603 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 FMO4P31512 558 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ATXN1P54253 815 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 SLC13A2Q13183 592 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CHSY3Q70JA7 882 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 LINGO2Q7L985 606 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 AMIGO2Q86SJ2 522 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 DSELQ8IZU8 1212 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 SMG7Q92540 1137 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 NSMCE3Q96MG7 304 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ZSWIM3Q96MP5 696 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 C7orf50Q9BRJ6 194 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ABHD16BQ9H3Z7 469 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 RGCCQ9H4X1 137 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 TLE6Q9H808 572 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ZFP57Q9NU63 452 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 SEC14L3Q9UDX4 400 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF225Q9UK10 706 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 C14orf166Q9Y224 244 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 DGKBQ9Y6T7 804 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 USP12O75317 370 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CCNB2O95067 398 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 MYCLP1P12525 358 aaPredicted RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ACO1P21399 889 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 KCNA5P22460 613 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 TAS2R43P59537 309 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 FPGSQ05932 587 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 EFEMP1Q12805 493 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 FADDQ13158 208 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ADGRE1Q14246 886 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 GRM3Q14832 879 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 GRK1Q15835 563 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 KCTD19Q17RG1 926 aaPredicted RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 DPY19L1Q2PZI1 675 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 IQSEC1Q6DN90 963 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 C16orf86Q6ZW13 317 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 SAMD14Q8IZD0 417 aaPredicted RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 OR52K1Q8NGK4 314 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 LACRTQ9GZZ8 138 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 C12orf65Q9H3J6 166 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ALG9Q9H6U8 611 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 DNAJC18Q9H819 358 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 FETUBQ9UGM5 382 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 PADI2Q9Y2J8 665 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CNTNAP5Q8WYK1 1306 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 C1orf196B1AJZ1 125 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 DCLK1O15075 740 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 POMCP01189 267 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 SRPRAP08240 638 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CCL5P13501 91 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ANXA8P13928 327 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 NOS2P35228 1153 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 TBX4P57082 545 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 BOP1Q14137 746 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 UBAP2LQ14157 1087 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ST3GAL2Q16842 350 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 KLHL36Q8N4N3 616 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CHST4Q8NCG5 386 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 C11orf65Q8NCR3 313 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 HLA-CQ95604 372 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 MARK4Q96L34 752 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF670Q9BS34 389 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 TMEM109Q9BVC6 243 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 ELOVL4Q9GZR5 314 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 BRD7Q9NPI1 651 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 MKS1Q9NXB0 559 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 IGSF9Q9P2J2 1179 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 NUFIP1Q9UHK0 495 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CYTH4Q9UIA0 394 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 CACNA1GO43497 2377 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 C3P01024 1663 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 A0A0J9YYE9 177 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 SLC19A2O60779 497 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 IFI30P13284 250 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 GLDCP23378 1020 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 RBMS1P29558 406 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 AXLP30530 894 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 POLR2JP52435 117 aaKnown RBP7.09□□□□□ -1.27
COLCA1-205ENST00000620864 AP5B1Q2VPB7 878 aa7.09□□□□□ -1.27
COLCA1-205ENST00000620864 FAM153CQ494X1 144 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms