RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 CLCNKAP51800 687 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 GDF10P55107 478 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 TMPRSS3P57727 454 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 GPLD1P80108 840 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 DR1Q01658 176 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 CLN3Q13286 438 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 KLF1Q13351 362 aaPredicted RBP15.4■□□□□ 0.06
LINC00221-202ENST00000619530 SQSTM1Q13501 440 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 SNX1Q13596 522 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 ITGA9Q13797 1035 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 TGIF1Q15583 401 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 LDLRAP1Q5SW96 308 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 TMEM71Q6P5X7 295 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 GPR155Q7Z3F1 870 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 NAT14Q8WUY8 206 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 RUNDC3BQ96NL0 473 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 PPP1R2P1Q96PQ5 205 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 TIMM29Q9BSF4 260 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 ASB8Q9H765 288 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 FOXJ2Q9P0K8 574 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 KLHL3Q9UH77 587 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 PCDHGA7Q9Y5G6 932 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 CCL22O00626 93 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 PPFIA2O75334 1257 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 ZNF189O75820 626 aaPredicted RBP15.4■□□□□ 0.06
LINC00221-202ENST00000619530 PRAMEF1O95521 474 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 FGF3P11487 239 aaPredicted RBP15.4■□□□□ 0.06
LINC00221-202ENST00000619530 MSH3P20585 1137 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 ECHS1P30084 290 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 CSTF2P33240 577 aaKnown RBP eCLIP15.4■□□□□ 0.06
LINC00221-202ENST00000619530 CTSCP53634 463 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 TRADDQ15628 312 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 SOWAHCQ53LP3 525 aaPredicted RBP15.4■□□□□ 0.06
LINC00221-202ENST00000619530 DENND5AQ6IQ26 1287 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 AMZ2Q86W34 360 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 ZFAND4Q86XD8 727 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 OR13C4Q8NGS5 318 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 SLC35B2Q8TB61 432 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 SEC14L1Q92503 715 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 SGF29Q96ES7 293 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 DPYSL5Q9BPU6 564 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 TRIM51Q9BSJ1 452 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.4■□□□□ 0.06
LINC00221-202ENST00000619530 ZCCHC2Q9C0B9 1178 aaKnown RBP15.4■□□□□ 0.06
LINC00221-202ENST00000619530 PIH1D1Q9NWS0 290 aaKnown RBP15.4■□□□□ 0.06
LINC00221-202ENST00000619530 ZNF624Q9P2J8 865 aaPredicted RBP15.4■□□□□ 0.06
LINC00221-202ENST00000619530 FAM8A1Q9UBU6 413 aa15.4■□□□□ 0.06
LINC00221-202ENST00000619530 OR52A4PA6NMU1 304 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 NVLO15381 856 aaKnown RBP15.39■□□□□ 0.05
LINC00221-202ENST00000619530 SRP72O76094 671 aaKnown RBP15.39■□□□□ 0.05
LINC00221-202ENST00000619530 TYRP1P17643 537 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 XRCC1P18887 633 aaPredicted RBP15.39■□□□□ 0.05
LINC00221-202ENST00000619530 SLC19A1P41440 591 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 UBE2IP63279 158 aaKnown RBP15.39■□□□□ 0.05
LINC00221-202ENST00000619530 TRA2AQ13595 282 aaKnown RBP eCLIP15.39■□□□□ 0.05
LINC00221-202ENST00000619530 SEPT6Q14141 434 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 FNBP1LQ5T0N5 605 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 TMEM164Q5U3C3 297 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 LRIG3Q6UXM1 1119 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 C11orf96Q7Z7L8 435 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 FAM129CQ86XR2 697 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 BEND7Q8N7W2 519 aaPredicted RBP15.39■□□□□ 0.05
LINC00221-202ENST00000619530 AGBL5Q8NDL9 886 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 DTX3LQ8TDB6 740 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 C1orf54Q8WWF1 131 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 CXorf40BQ96DE9 158 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 DPH5Q9H2P9 285 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 OCIAD1Q9NX40 245 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 PRDM4Q9UKN5 801 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 PSMD13Q9UNM6 376 aa15.39■□□□□ 0.05
LINC00221-202ENST00000619530 EFCAB7A8K855 629 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 C9orf172C9J069 976 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 HGSO14964 777 aaPredicted RBP15.38■□□□□ 0.05
LINC00221-202ENST00000619530 THRAP10827 490 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 BRAFP15056 766 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 UCNP55089 124 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 PDE1BQ01064 536 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 MSLNQ13421 630 aaPredicted RBP15.38■□□□□ 0.05
LINC00221-202ENST00000619530 CLCA4Q14CN2 919 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 ABRAXAS1Q6UWZ7 409 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 SLC13A5Q86YT5 568 aaPredicted RBP15.38■□□□□ 0.05
LINC00221-202ENST00000619530 IQCKQ8N0W5 287 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 AVL9Q8NBF6 648 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 DDHD1Q8NEL9 900 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 JPH3Q8WXH2 748 aaPredicted RBP15.38■□□□□ 0.05
LINC00221-202ENST00000619530 ART4Q93070 314 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 BBC3Q96PG8 261 aaPredicted RBP15.38■□□□□ 0.05
LINC00221-202ENST00000619530 SLC39A1Q9NY26 324 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 CRLS1Q9UJA2 301 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 ZNF148Q9UQR1 794 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 WDR37Q9Y2I8 494 aa15.38■□□□□ 0.05
LINC00221-202ENST00000619530 IGSF10Q6WRI0 2623 aa15.37■□□□□ 0.05
LINC00221-202ENST00000619530 CCDC78A2IDD5 438 aa15.37■□□□□ 0.05
LINC00221-202ENST00000619530 EIF4E1BA6NMX2 242 aaKnown RBP15.37■□□□□ 0.05
LINC00221-202ENST00000619530 PSMD3O43242 534 aa15.37■□□□□ 0.05
LINC00221-202ENST00000619530 LIASO43766 372 aa15.37■□□□□ 0.05
LINC00221-202ENST00000619530 IFNB1P01574 187 aa15.37■□□□□ 0.05
LINC00221-202ENST00000619530 AMD1P17707 334 aa15.37■□□□□ 0.05
LINC00221-202ENST00000619530 ZNF140P52738 457 aaPredicted RBP15.37■□□□□ 0.05
LINC00221-202ENST00000619530 EPHA4P54764 986 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms