RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 MTHFD1P11586 935 aaKnown RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 CTNNA2P26232 953 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 OAS2P29728 719 aaKnown RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 HADHAP40939 763 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 ATP5OP48047 213 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 LEPRP48357 1165 aaKnown RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 TLE1Q04724 770 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 TBX2Q13207 712 aaPredicted RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 TUBB3Q13509 450 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 RPE65Q16518 533 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 DEFB109BQ30KR1 87 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 LACTB2Q53H82 288 aaPredicted RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 TMTC4Q5T4D3 741 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 ARMC6Q6NXE6 501 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 ZNF449Q6P9G9 518 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 TMEM220Q6QAJ8 160 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 SARM1Q6SZW1 724 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 FAM92BQ6ZTR7 304 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 DAAM2Q86T65 1068 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 OOSP2Q86WS3 158 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 CDKL3Q8IVW4 592 aaPredicted RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 UNC5BQ8IZJ1 945 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 RASGEF1AQ8N9B8 481 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 GALNT6Q8NCL4 622 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 ULK4Q96C45 1275 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 DCUN1D1Q96GG9 259 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 OXNAD1Q96HP4 312 aaPredicted RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 LINC00615Q96LM1 132 aaPredicted RBP11.67□□□□□ -0.54
UPF3B-204ENST00000619445 CCM2Q9BSQ5 444 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 GPR87Q9BY21 358 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 VPS37BQ9H9H4 285 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 HYOU1Q9Y4L1 999 aa11.67□□□□□ -0.54
UPF3B-204ENST00000619445 CCDC66A2RUB6 948 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 MAP3K7O43318 606 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 UGT1A9O60656 530 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 GSTM1P09488 218 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 SLC35G4P0C7Q5 338 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 UGT1A6P19224 532 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 UGT1A1P22309 533 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 UGT1A4P22310 534 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 PTPN7P35236 360 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 CHRNA4P43681 627 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 HSD11B2P80365 405 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 NFKB2Q00653 900 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 GSTM4Q03013 218 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 NOMO1Q15155 1222 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 BCL7AQ4VC05 210 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 DNTTIP2Q5QJE6 756 aaKnown RBP11.66□□□□□ -0.54
UPF3B-204ENST00000619445 FNBP1LQ5T0N5 605 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 C16orf46Q6P387 395 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 B4GALNT4Q76KP1 1039 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 OR2L2Q8NH16 312 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 TRIM5Q9C035 493 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 TRIM4Q9C037 500 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 UGT1A7Q9HAW7 530 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 UGT1A10Q9HAW8 530 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 UGT1A8Q9HAW9 530 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 SYTL2Q9HCH5 934 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 IMP3Q9NV31 184 aaKnown RBP11.66□□□□□ -0.54
UPF3B-204ENST00000619445 TRIM10Q9UDY6 481 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 CROTQ9UKG9 612 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 WDR37Q9Y2I8 494 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 PCDHA13Q9Y5I0 950 aa11.66□□□□□ -0.54
UPF3B-204ENST00000619445 SEC16AO15027 2179 aa11.65□□□□□ -0.54
UPF3B-204ENST00000619445 UBA6A0AVT1 1052 aaPredicted RBP11.65□□□□□ -0.55
UPF3B-204ENST00000619445 OR5K3A6NET4 321 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 OR2AG2A6NM03 316 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 RFPL1O75677 317 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 SRP72O76094 671 aaKnown RBP11.65□□□□□ -0.55
UPF3B-204ENST00000619445 TJP3O95049 919 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 ZBTB11O95625 1053 aaPredicted RBP11.65□□□□□ -0.55
UPF3B-204ENST00000619445 ITGALP20701 1170 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 CTNNA1P35221 906 aaKnown RBP11.65□□□□□ -0.55
UPF3B-204ENST00000619445 CTSCP53634 463 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 TUBB4BP68371 445 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 SH3BP2P78314 561 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 KLRB1Q12918 225 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 PRKAA1Q13131 559 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 DNASE1L3Q13609 305 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 TUBB2AQ13885 445 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 NFE2L1Q14494 772 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 GPR33Q49SQ1 333 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 TCTN3Q6NUS6 607 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 RANBP10Q6VN20 620 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 TXLNBQ8N3L3 684 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 TC2NQ8N9U0 490 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 RNF214Q8ND24 703 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 THAP4Q8WY91 577 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 ABHD17AQ96GS6 310 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 TUBB2BQ9BVA1 445 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 FICDQ9BVA6 458 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 ASB8Q9H765 288 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 KIR3DX1Q9H7L2 352 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 FANCEQ9HB96 536 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 LHX9Q9NQ69 397 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 LATS2Q9NRM7 1088 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 FGF21Q9NSA1 209 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 HRASLS2Q9NWW9 162 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 CRLS1Q9UJA2 301 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 PCDHA3Q9Y5H8 950 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms