RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CCDC74BQ96LY2 380 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 NAP1L3Q99457 506 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-228ENST00000618469 TBC1D10AQ9BXI6 508 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-228ENST00000618469 TMEM9Q9P0T7 183 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 PISDQ9UG56 409 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 TTC7AQ9ULT0 858 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-228ENST00000618469 WDR37Q9Y2I8 494 aa15.69■□□□□ 0.1
BRCA1-228ENST00000618469 TRBV5-4A0A0C4DH59 114 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 OR51F1A6NGY5 319 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 LILRA5A6NI73 299 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 KCNJ13O60928 360 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 ITGA2BP08514 1039 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 MPSTP25325 297 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 PRLHRP49683 370 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 TERF1P54274 439 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 EPHA4P54764 986 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 NFKB2Q00653 900 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 CACNG1Q06432 222 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 VAC14Q08AM6 782 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 C16orf72Q14CZ0 275 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 SKIDA1Q1XH10 827 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 IGF2-ASQ6U949 168 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 ABRAXAS1Q6UWZ7 409 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 WASH2PQ6VEQ5 465 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 SERPINA9Q86WD7 417 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 RCBTB1Q8NDN9 531 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 PPHLN1Q8NEY8 458 aaKnown RBP15.68■□□□□ 0.1
BRCA1-228ENST00000618469 OR13J1Q8NGT2 312 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 MAGOHBQ96A72 148 aaKnown RBP15.68■□□□□ 0.1
BRCA1-228ENST00000618469 RANBP9Q96S59 729 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 WASH6PQ9NQA3 447 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 POT1Q9NUX5 634 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 ZDHHC3Q9NYG2 299 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 ZNF624Q9P2J8 865 aaPredicted RBP15.68■□□□□ 0.1
BRCA1-228ENST00000618469 SLC2A6Q9UGQ3 507 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 PYCARDQ9ULZ3 195 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 SNX12Q9UMY4 172 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 PSMD13Q9UNM6 376 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 TCAF1Q9Y4C2 921 aa15.68■□□□□ 0.1
BRCA1-228ENST00000618469 IGHV5-10-1A0A0J9YXX1 117 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 CCDC162PA2VCL2 907 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 SGTAO43765 313 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 THRAP10827 490 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 ATP1B2P14415 290 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-228ENST00000618469 XRCC1P18887 633 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-228ENST00000618469 ITIH1P19827 911 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 ADRA1DP25100 572 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 SLC19A1P41440 591 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 MLLT3P42568 568 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-228ENST00000618469 LIMK2P53671 638 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 SESN2P58004 480 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-228ENST00000618469 ERVPABLB-1P60509 514 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 LAMB3Q13751 1172 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 CLCA4Q14CN2 919 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 DBN1Q16643 649 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 TSTD2Q5T7W7 516 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 AFTPHQ6ULP2 937 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 ZNF574Q6ZN55 896 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-228ENST00000618469 TMEM26Q6ZUK4 368 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 JAMLQ86YT9 394 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 PIANPQ8IYJ0 282 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 OR4D9Q8NGE8 314 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 GPR150Q8NGU9 434 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 OR2L2Q8NH16 312 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 HEXDCQ8WVB3 486 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 MED8Q96G25 268 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 WBP1Q96G27 269 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 SLC46A1Q96NT5 459 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 CMKLR1Q99788 373 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 DPYSL5Q9BPU6 564 aa15.67■□□□□ 0.1
BRCA1-228ENST00000618469 AKAP7Q9P0M2 348 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-228ENST00000618469 DNMT3AQ9Y6K1 912 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-228ENST00000618469 IGLV3-16A0A075B6K0 115 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 PRAMEF33A0A0G2JMD5 474 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 GOLGA6L10A0A0M3HER8 536 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 MGAT4DA6NG13 374 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 CDRT15L2A8MXV6 281 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 HGSO14964 777 aaPredicted RBP15.66■□□□□ 0.1
BRCA1-228ENST00000618469 ZNF185O15231 689 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 PHF2O75151 1096 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 KRT14P02533 472 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 SLC35G4P0C7Q5 338 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 TPSB2P20231 275 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 PSMA3P25788 255 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 FOXN2P32314 431 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 UCNP55089 124 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 CRADDP78560 199 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 NFATC3Q12968 1075 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 GPS1Q13098 491 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 TPSAB1Q15661 275 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 CYP1B1Q16678 543 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 SNAP47Q5SQN1 464 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 TMEM71Q6P5X7 295 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 CCDC137Q6PK04 289 aaKnown RBP15.66■□□□□ 0.1
BRCA1-228ENST00000618469 LURAP1LQ8IV03 231 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 HM13Q8TCT9 377 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 ACTRT1Q8TDG2 376 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 NCSTNQ92542 709 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms