RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 EFCAB1Q9HAE3 211 aa17.07■□□□□ 0.32
PCDHGC3-205ENST00000617641 RFXAPO00287 272 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 GIPC1O14908 333 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 TAPBPO15533 448 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 PLXNA2O75051 1894 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 UROSP10746 265 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 FCARP24071 287 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 HSPA7P48741 367 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 SESN3P58005 492 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 ERVPABLB-1P60509 514 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 TCHHL1Q5QJ38 904 aaPredicted RBP17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 TANGO2Q6ICL3 276 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 DPPA4Q7L190 304 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 CDYL2Q8N8U2 506 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 ACOX2Q99424 681 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 EGFL8Q99944 293 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 RIOK2Q9BVS4 552 aaKnown RBP17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 HPS4Q9NQG7 708 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 MRGBPQ9NV56 204 aa17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 PTBP2Q9UKA9 531 aaKnown RBP17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 TNPO3Q9Y5L0 923 aaKnown RBP17.06■□□□□ 0.32
PCDHGC3-205ENST00000617641 ATP1B2P14415 290 aaPredicted RBP17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 MMP12P39900 470 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 ARL1P40616 181 aaPredicted RBP17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 MTTPP55157 894 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 DCDC1P59894 354 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 ART3Q13508 389 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 GRIN2CQ14957 1233 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 CCDC6Q16204 474 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 PREPLQ4J6C6 727 aaPredicted RBP17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 WLSQ5T9L3 541 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 LETMD1Q6P1Q0 360 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 PAOXQ6QHF9 649 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 SERPINA13PQ6UXR4 307 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 NUSAP1Q9BXS6 441 aaKnown RBP17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 SMOXQ9NWM0 555 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 FADS2P1A8MWK0 482 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 OR7A17O14581 309 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 CFLARO15519 480 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 VCLP18206 1134 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 NFKBIAP25963 317 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 AOAHP28039 575 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 ATP4BP51164 291 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 NME5P56597 212 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 STX1BP61266 288 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 GTF2H2Q13888 395 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 KIF19Q2TAC6 998 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 ZNF648Q5T619 568 aaPredicted RBP17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 HENMT1Q5T8I9 393 aaKnown RBP17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 GTF2H2CQ6P1K8 395 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 MBOAT1Q6ZNC8 495 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 MYLK4Q86YV6 388 aaPredicted RBP17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 DCUN1D1Q96GG9 259 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 LMAN2LQ9H0V9 348 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 WDR41Q9HAD4 459 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 DZANK1Q9NVP4 752 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 GDE1Q9NZC3 331 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 SUN2Q9UH99 717 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 POMPQ9Y244 141 aa17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 TCF20Q9UGU0 1960 aaKnown RBP17.05■□□□□ 0.32
PCDHGC3-205ENST00000617641 LINC01565O15544 149 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 TBX10O75333 385 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 CBSLP0DN79 551 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 HGFP14210 728 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 LBPP18428 481 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 GPX3P22352 226 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 CBSP35520 551 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 DPP6P42658 865 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 PKNOX1P55347 436 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 CREB5Q02930 508 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 HSPA14Q0VDF9 509 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 MAPRE2Q15555 327 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 BNC2Q6ZN30 1099 aaPredicted RBP17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 GPR149Q86SP6 731 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 PGAM4Q8N0Y7 254 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 CDRT15Q96T59 188 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 TMEM79Q9BSE2 394 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 WWOXQ9NZC7 414 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 FBP2O00757 339 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 CHEK2O96017 543 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 ELFN1P0C7U0 828 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 GDF5P43026 501 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 PTDSS1P48651 473 aaKnown RBP17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 CRY1Q16526 586 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 C9orf64Q5T6V5 341 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 VITQ6UXI7 678 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 LIPIQ6XZB0 460 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 TECPR1Q7Z6L1 1165 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 TRAM1L1Q8N609 369 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 HCAR2Q8TDS4 363 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 RHBDF1Q96CC6 855 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 WRAP53Q9BUR4 548 aaKnown RBP17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 MRPL1Q9BYD6 325 aaKnown RBP17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 KLHL42Q9P2K6 505 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 PRPF19Q9UMS4 504 aaKnown RBP17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 C15orf41Q9Y2V0 281 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 MUC22E2RYF6 1773 aaPredicted RBP17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 COL4A3Q01955 1670 aa17.04■□□□□ 0.32
PCDHGC3-205ENST00000617641 ANTXRLA6NF34 631 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 SNRPB2P08579 225 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms