RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 KCTD8Q6ZWB6 473 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 ZDHHC14Q8IZN3 488 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 HDAC2Q92769 488 aaKnown RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 RHBDF1Q96CC6 855 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 AP2M1Q96CW1 435 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 MUTYHQ9UIF7 546 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 C2orf92A0A1B0GVN3 265 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 HAT1O14929 419 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 KIAA0355O15063 1070 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 KCNQ3O43525 872 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 SLC22A3O75751 556 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 UGT2B4P06133 528 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 ETS1P14921 441 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 CASP9P55211 416 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 IL9RQ01113 521 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 ZNF33AQ06730 810 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 AGAP7PQ5VUJ5 663 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 ZER1Q7Z7L7 766 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 DEFB124Q8NES8 71 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 DNAJA3Q96EY1 480 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 FAM163AQ96GL9 167 aaPredicted RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 AGAP4Q96P64 663 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 WNT8AQ9H1J5 351 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 FARSBQ9NSD9 589 aaKnown RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 LOC102723532A0A0G2JNH3 316 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 AIM2O14862 343 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 GALR2O43603 387 aaPredicted RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 TSPAN9O75954 239 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 SERPINA1P01009 418 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 RLN1P04808 185 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 HSMCR30P0CW71 290 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 VAC14Q08AM6 782 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 SHHQ15465 462 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 RAD9BQ6WBX8 426 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 FBXL14Q8N1E6 418 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 PLD5Q8N7P1 536 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 NECAB3Q96P71 396 aaPredicted RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 STRBPQ96SI9 672 aaKnown RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 FAM207AQ9NSI2 230 aaPredicted RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 PCDHA3Q9Y5H8 950 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 LEFTY2O00292 366 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 DIAPH2O60879 1101 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 DAB1O75553 588 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 BCL10O95999 233 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 F2P00734 622 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 FXR2P51116 673 aaKnown RBP eCLIP3.31□□□□□ -1.88
LPP-220ENST00000617246 RPL19P84098 196 aaKnown RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 CCZ1BP86790 482 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 CCZ1P86791 482 aaPredicted RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 GUCY1A3Q02108 690 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 KLRB1Q12918 225 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 MALLQ13021 153 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 FAM189A2Q15884 450 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 LSM12Q3MHD2 195 aaKnown RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 FAM180BQ6P0A1 224 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 FAM76AQ8TAV0 307 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 EGLN1Q9GZT9 426 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 PPP4R1LQ9P1A2 415 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 TRPS1Q9UHF7 1281 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 CCDC188H7C350 402 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 TRIM24O15164 1050 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 TNFSF14O43557 240 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 RTN2O75298 545 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 SMNDC1O75940 238 aaKnown RBP eCLIP3.31□□□□□ -1.88
LPP-220ENST00000617246 LEXMQ3ZCV2 418 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 CAPN13Q6MZZ7 669 aaPredicted RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 NOXRED1Q6NXP6 359 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.31□□□□□ -1.88
LPP-220ENST00000617246 CMTM4Q8IZR5 234 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 SPDL1Q96EA4 605 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 SH2D3AQ9BRG2 576 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 CEP44Q9C0F1 390 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 JMJD4Q9H9V9 463 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 CDH20Q9HBT6 801 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 NDRG4Q9ULP0 352 aaKnown RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 TRIM64CA6NLI5 447 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 CEP104O60308 925 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 BMP1P13497 986 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 CNTFP26441 200 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 GRM7Q14831 915 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 SEC23AQ15436 765 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 TRIP6Q15654 476 aaKnown RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 CCL14Q16627 93 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 ACSM3Q53FZ2 586 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 PIWIL3Q7Z3Z3 882 aaKnown RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 ZFPM2Q8WW38 1151 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 DPH1Q9BZG8 443 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 PPCSQ9HAB8 311 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 KCNJ16Q9NPI9 418 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 FBXO28Q9NVF7 368 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 ADPRHL2Q9NX46 363 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 GPRC5BQ9NZH0 403 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 A0A087WUU8 490 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 TTC24A2A3L6 582 aaPredicted RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 B4GALT2O60909 372 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 TKTP29401 623 aaKnown RBP3.31□□□□□ -1.88
LPP-220ENST00000617246 UQCRC1P31930 480 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 CRISP1P54107 249 aa3.31□□□□□ -1.88
LPP-220ENST00000617246 DUSP4Q13115 394 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms