RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 WISP3O95389 354 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-208ENST00000613073 PPP3CCP48454 512 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 NKX2-5P52952 324 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-208ENST00000613073 PIANPQ8IYJ0 282 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 APCDD1Q8J025 514 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 SMG9Q9H0W8 520 aaKnown RBP16.28■□□□□ 0.2
CNOT3-208ENST00000613073 POLR3BQ9NW08 1133 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-208ENST00000613073 CCDC167Q9P0B6 97 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 VTI1BQ9UEU0 232 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 ARIH1Q9Y4X5 557 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-208ENST00000613073 H3BMM5 538 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 ZNF701M0R085 212 aaPredicted RBP16.27■□□□□ 0.2
CNOT3-208ENST00000613073 DLGAP1O14490 977 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 RHOBTB1O94844 696 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 CD1DP15813 335 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 ZNF37AP17032 561 aaPredicted RBP16.27■□□□□ 0.2
CNOT3-208ENST00000613073 CTPS1P17812 591 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 CDH13P55290 713 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 KCNC4Q03721 635 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 PHKG1Q16816 387 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 FBXO48Q5FWF7 155 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 PSAPL1Q6NUJ1 521 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 PIWIL3Q7Z3Z3 882 aaKnown RBP16.27■□□□□ 0.2
CNOT3-208ENST00000613073 ZNF784Q8NCA9 323 aaPredicted RBP16.27■□□□□ 0.2
CNOT3-208ENST00000613073 TRUB1Q8WWH5 349 aaKnown RBP16.27■□□□□ 0.2
CNOT3-208ENST00000613073 CLEC4EQ9ULY5 219 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 C5orf42Q9H799 3197 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 ANKRD12Q6UB98 2062 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 TYW5A2RUC4 315 aaKnown RBP16.27■□□□□ 0.2
CNOT3-208ENST00000613073 TOR1BO14657 336 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 CLOCKO15516 846 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 OR1I1O60431 355 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 NDUFS3O75489 264 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 SRP72O76094 671 aaKnown RBP16.27■□□□□ 0.2
CNOT3-208ENST00000613073 PRAMEF12O95522 483 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 POLR2IP36954 125 aaKnown RBP16.27■□□□□ 0.2
CNOT3-208ENST00000613073 OPRL1P41146 370 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 GSSP48637 474 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 NSUN2Q08J23 767 aaKnown RBP eCLIP16.27■□□□□ 0.2
CNOT3-208ENST00000613073 MERTKQ12866 999 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 CUZD1Q86UP6 607 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 CCDC126Q96EE4 140 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 CCDC138Q96M89 665 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 AARSD1Q9BTE6 412 aaKnown RBP16.27■□□□□ 0.2
CNOT3-208ENST00000613073 ADGRE3Q9BY15 652 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 GALPQ9UBC7 116 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 LHX3Q9UBR4 397 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 STOML2Q9UJZ1 356 aa16.27■□□□□ 0.2
CNOT3-208ENST00000613073 LRRC14BA6NHZ5 514 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 ZBBXA8MT70 800 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 SLCO1B7G3V0H7 640 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 H0YJX3 145 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 UBXN8O00124 270 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 FGF18O76093 207 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 SIX3O95343 332 aaPredicted RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 OGNP20774 298 aaKnown RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 LPOP22079 712 aaPredicted RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 S100A1P23297 94 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 SLC7A1P30825 629 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 GKP32189 559 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 MC4RP32245 332 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 TPTEP56180 551 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 OR4D1Q15615 310 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 ZRANB3Q5FWF4 1079 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 CLEC6AQ6EIG7 209 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 NCEH1Q6PIU2 408 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 PAQR3Q6TCH7 311 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 AFTPHQ6ULP2 937 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 PAF1Q8N7H5 531 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 HJURPQ8NCD3 748 aaPredicted RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 TNIP2Q8NFZ5 429 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 RPL10LQ96L21 214 aaKnown RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 IL1RL2Q9HB29 575 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 RIC8BQ9NVN3 520 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 CFAP97Q9P2B7 532 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 A0A1W2PRU2 124 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 KPNA4O00629 521 aaPredicted RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 UBFD1O14562 309 aaKnown RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 SMAD6O43541 496 aaKnown RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 ALPIP09923 528 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 TYSND1Q2T9J0 566 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 C1orf53Q5VUE5 145 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 PPP4R4Q6NUP7 873 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 DSG4Q86SJ6 1040 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 ITIH5Q86UX2 942 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 EPHX4Q8IUS5 362 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 BBS7Q8IWZ6 715 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 CMTR2Q8IYT2 770 aaKnown RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 ZNF420Q8TAQ5 688 aaPredicted RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 TCF12Q99081 682 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 EFHD1Q9BUP0 239 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 POLE4Q9NR33 117 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 STX7O15400 261 aaKnown RBP16.26■□□□□ 0.19
CNOT3-208ENST00000613073 TIMP1P01033 207 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 NME5P56597 212 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 C1QTNF8P60827 252 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 PTPRNQ16849 979 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 PFKFB4Q16877 469 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 CAMK1DQ8IU85 385 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 PBXIP1Q96AQ6 731 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms