RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 KCTD13Q8WZ19 329 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 TDRD1Q9BXT4 1180 aaKnown RBP12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 GDAP2Q9NXN4 497 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 EMC3Q9P0I2 261 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 SCAMP1O15126 338 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 WBP4O75554 376 aaKnown RBP12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 STX11O75558 287 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 SEC24AO95486 1093 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 FGF19O95750 216 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 SNAI1O95863 264 aaPredicted RBP12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 HLA-DQA2P01906 255 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 APODP05090 189 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 IL6P05231 212 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 COL6A1P12109 1028 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 GJA1P17302 382 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 PEX2P28328 305 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 ACVRL1P37023 503 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 MTHFRP42898 656 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 XIAPP98170 497 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 C6orf52Q5T4I8 152 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 IQCF2Q8IXL9 164 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 VANGL1Q8TAA9 524 aaPredicted RBP12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 ZHX1-C8orf76Q96EF9 292 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 MFSD1Q9H3U5 465 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 DUS2Q9NX74 493 aaKnown RBP12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 FAM53CQ9NYF3 392 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 POMPQ9Y244 141 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 MFHAS1Q9Y4C4 1052 aa12.37□□□□□ -0.43
TNFAIP3-206ENST00000612899 GABRDO14764 452 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 NPHS1O60500 1241 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 PDE9AO76083 593 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 MFN2O95140 757 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 KELP23276 732 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 RPL4P36578 427 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 CSKP41240 450 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 NSG1P42857 185 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 ATP12AP54707 1039 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 INCA1Q0VD86 236 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 SLC9B1Q4ZJI4 515 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 PERM1Q5SV97 790 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 TXNDC8Q6A555 127 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 TMEM220Q6QAJ8 160 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 CBR4Q8N4T8 237 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 UBR7Q8N806 425 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 MYDGFQ969H8 173 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 CDKN2AIPNLQ96HQ2 116 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 SLC38A2Q96QD8 506 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 EHD3Q9NZN3 535 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 MRPS7Q9Y2R9 242 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 FPGTO14772 594 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 ITM2AO43736 263 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 IDSP22304 550 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 ADSLP30566 484 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 OLR1P78380 273 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 MSANTD2Q6P1R3 559 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 ZC3H3Q8IXZ2 948 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 PEBP4Q96S96 227 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 HTATIP2Q9BUP3 242 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 EBPLQ9BY08 206 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 CRISPLD1Q9H336 500 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 TEX264Q9Y6I9 313 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 MYH10P35580 1976 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 CHURC1-FNTBB4DL54 471 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 CCNYL3P0C7X3 344 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 NCK1P16333 377 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 CAP1Q01518 475 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 COX10Q12887 443 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 KLF1Q13351 362 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 GRB14Q14449 540 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 MED22Q15528 200 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 ATAT1Q5SQI0 421 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 SMYD1Q8NB12 490 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 OR10A6Q8NH74 314 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 C2orf15Q8WU43 125 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 PIWIL1Q96J94 861 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 Q96MT0 163 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 TUBGCP5Q96RT8 1024 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 HS3ST4Q9Y661 456 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 ARPC4-TTLL3A0A0A6YYG9 625 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 PER2O15055 1255 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 MGRN1O60291 552 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 RGS20O76081 388 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 CCNA2P20248 432 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 ASMTP46597 345 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 DGKGP49619 791 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 SULT1C3Q6IMI6 304 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 UBASH3BQ8TF42 649 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 NPY6RQ99463 290 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 XYLT2Q9H1B5 865 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 SEC14L3Q9UDX4 400 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 SLC2A6Q9UGQ3 507 aa12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 RSL24D1Q9UHA3 163 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-206ENST00000612899 ONECUT3O60422 494 aaPredicted RBP12.35□□□□□ -0.43
TNFAIP3-206ENST00000612899 S100A9P06702 114 aaKnown RBP12.35□□□□□ -0.43
TNFAIP3-206ENST00000612899 CTSKP43235 329 aa12.35□□□□□ -0.43
TNFAIP3-206ENST00000612899 FAM174BQ3ZCQ3 159 aa12.35□□□□□ -0.43
TNFAIP3-206ENST00000612899 C11orf88Q6PI97 169 aa12.35□□□□□ -0.43
TNFAIP3-206ENST00000612899 SH3RF2Q8TEC5 729 aa12.35□□□□□ -0.43
TNFAIP3-206ENST00000612899 EXOSC8Q96B26 276 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms