RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 BEND7Q8N7W2 519 aaPredicted RBP16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 GLIS1Q8NBF1 620 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 ADAMTS17Q8TE56 1095 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 ZNF501Q96CX3 271 aaPredicted RBP16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 SMAD5Q99717 465 aaKnown RBP16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 ISCUQ9H1K1 167 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 LATS2Q9NRM7 1088 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 AIPL1Q9NZN9 384 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 COPG1Q9Y678 874 aaKnown RBP16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 DOPEY1Q5JWR5 2465 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 CRYBG3Q68DQ2 2970 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 OR6C74A6NCV1 312 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 SKILP12757 684 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 CDH3P22223 829 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 OTX2P32243 289 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 PRKCIP41743 596 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 GBE1Q04446 702 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 ADCY2Q08462 1091 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 LAMB3Q13751 1172 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 STX1AQ16623 288 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 PLEKHN1Q494U1 663 aaPredicted RBP16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 C1QL3Q5VWW1 255 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 HGSNATQ68CP4 663 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 ZNF517Q6ZMY9 492 aaPredicted RBP16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 CLEC1AQ8NC01 280 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 FER1L6-AS2Q96M78 137 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 IP6K3Q96PC2 410 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 RUBCNLQ9H714 662 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 ACTR5Q9H9F9 607 aaPredicted RBP16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 BPIFA1Q9NP55 256 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 AGPAT4Q9NRZ5 378 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 CHMP5Q9NZZ3 219 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 SERTAD3Q9UJW9 196 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 HIVEP3Q5T1R4 2406 aa16.93■□□□□ 0.3
CHMP4A-211ENST00000609024 PEX12O00623 359 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 IPO13O94829 963 aaKnown RBP16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 IGHEP01854 428 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 MTHFD1P11586 935 aaKnown RBP16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 PBLDP30039 288 aaPredicted RBP16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 GLRBP48167 497 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 AP1B1Q10567 949 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 ATP1A4Q13733 1029 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 GSE1Q14687 1217 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 PPP2R5EQ16537 467 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 ATP13A5Q4VNC0 1218 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 KHDC1Q4VXA5 237 aaKnown RBP16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 LDLRAP1Q5SW96 308 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 PLEKHS1Q5SXH7 462 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 ZDHHC20Q5W0Z9 365 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 C11orf96Q7Z7L8 435 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 SYTL1Q8IYJ3 562 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 ZADH2Q8N4Q0 377 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 SLC38A9Q8NBW4 561 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 FAM71BQ8TC56 605 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 AGAP3Q96P47 875 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 TLR10Q9BXR5 811 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 THAP2Q9H0W7 228 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 SYTL2Q9HCH5 934 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 CFAP20Q9Y6A4 193 aaKnown RBP16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 DNMT3AQ9Y6K1 912 aaPredicted RBP16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 COLEC10Q9Y6Z7 277 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 LRBAP50851 2863 aa16.92■□□□□ 0.3
CHMP4A-211ENST00000609024 HNRNPRO43390 633 aaKnown RBP16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 PREPP48147 710 aa16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 IFI35P80217 286 aaPredicted RBP16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 DMPKQ09013 629 aa16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 FAM69BQ5VUD6 431 aa16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 TMEM220Q6QAJ8 160 aa16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 ZBTB2Q8N680 514 aa16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 N4BP2L2Q92802 583 aaPredicted RBP16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 C12orf66Q96MD2 445 aa16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 TRIB3Q96RU7 358 aa16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 C17orf62Q9BQA9 187 aa16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 DPH2Q9BQC3 489 aaPredicted RBP16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 GPN3Q9UHW5 284 aaPredicted RBP16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 BTRCQ9Y297 605 aa16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 HEY1Q9Y5J3 304 aa16.91■□□□□ 0.3
CHMP4A-211ENST00000609024 OR2AG2A6NM03 316 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 TMEM150CB9EJG8 249 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 MATN2O00339 956 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 DDX3YO15523 660 aaKnown RBP16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 NDST3O95803 873 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 HBQ1P09105 142 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 SLC35G4P0C7Q5 338 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 HLA-DPA1P20036 260 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 AKT1P31749 480 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 ARCN1P48444 511 aaKnown RBP16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 PPIDQ08752 370 aaKnown RBP16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 ZBTB17Q13105 803 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 NFE2L1Q14494 772 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 NCF4Q15080 339 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 NFKBIBQ15653 356 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 LONRF2Q1L5Z9 754 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 ATP13A4Q4VNC1 1196 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 PRAMEF17Q5VTA0 474 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 LCN10Q6JVE6 187 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 ZFPM2Q8WW38 1151 aa16.9■□□□□ 0.3
CHMP4A-211ENST00000609024 MARVELD3Q96A59 401 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms