RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SLC30A9Q6PML9 568 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 ASCL5Q7RTU5 278 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 CMC1Q7Z7K0 106 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 NRROSQ86YC3 692 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 CEP97Q8IW35 865 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 DCLK2Q8N568 766 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 MINDY1Q8N5J2 469 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 SIDT2Q8NBJ9 832 aaKnown RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 OR2L2Q8NH16 312 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 FAM45AQ8TCE6 357 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 LMX1AQ8TE12 382 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 ELMO1Q92556 727 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 KCNJ9Q92806 393 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 ZIM3Q96PE6 472 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 GPR21Q99679 349 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 GPR22Q99680 433 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 CCDC77Q9BR77 488 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 TIMM29Q9BSF4 260 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 CCM2Q9BSQ5 444 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 OSGEPL1Q9H4B0 414 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 GAREM1Q9H706 876 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 ERVMER34-1Q9H9K5 563 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 RXFP3Q9NSD7 469 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 KLC4Q9NSK0 619 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 SEMA4GQ9NTN9 838 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 PSMC3IPQ9P2W1 217 aaPredicted RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 TBK1Q9UHD2 729 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 SLC24A2Q9UI40 661 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 TSR3Q9UJK0 312 aaKnown RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 SLC39A10Q9ULF5 831 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 CORO1CQ9ULV4 474 aaPredicted RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 NFS1Q9Y697 457 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 IKBKGQ9Y6K9 419 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 GPR179Q6PRD1 2367 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 PI4KAP42356 2102 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 SDK1Q7Z5N4 2213 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 A0A1B0GTQ1 180 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 TLDC2A0PJX2 215 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 MGAT4DA6NG13 374 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 PRR19A6NJB7 356 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 PROB1E7EW31 1015 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 H3BM21 787 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 FFAR2O15552 330 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 PHGDHO43175 533 aaKnown RBP7.54□□□□□ -1.2
MSH6-211ENST00000606499 AQP9O43315 295 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 SNX2O60749 519 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 VPS26AO75436 327 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 CER1O95813 267 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 EML2O95834 649 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 SYPP08247 313 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 ZNF806P0C7X5 589 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 FDXRP22570 491 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 DGKAP23743 735 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 RPL10P27635 214 aaKnown RBP7.54□□□□□ -1.2
MSH6-211ENST00000606499 AOAHP28039 575 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 EPHA8P29322 1005 aaPredicted RBP7.54□□□□□ -1.2
MSH6-211ENST00000606499 GMPRP36959 345 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 ACTR1BP42025 376 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 BLKP51451 505 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 TAS2R39P59534 338 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 ACTR1AP61163 376 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 ARHGAP8P85298 464 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 ZNF844Q08AG5 666 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 HSPA14Q0VDF9 509 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 ILF3Q12906 894 aaKnown RBP eCLIP7.54□□□□□ -1.23e-7■■■□□ 17
MSH6-211ENST00000606499 LRP8Q14114 963 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 USP10Q14694 798 aaKnown RBP7.54□□□□□ -1.2
MSH6-211ENST00000606499 CASP8Q14790 479 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 TMED2Q15363 201 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 SEPT7Q16181 437 aaKnown RBP7.54□□□□□ -1.2
MSH6-211ENST00000606499 DEFB133Q30KQ1 61 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 ADGRD1Q6QNK2 874 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 TAOK1Q7L7X3 1001 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 OTOAQ7RTW8 1153 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 AMZ2Q86W34 360 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 GATAD2AQ86YP4 633 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 VRK3Q8IV63 474 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 SFTPA2Q8IWL1 248 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 CPNE9Q8IYJ1 553 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 CFAP206Q8IYR0 622 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 IQCKQ8N0W5 287 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 ZBTB2Q8N680 514 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 HM13Q8TCT9 377 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 CD200R1Q8TD46 325 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 GPBAR1Q8TDU6 330 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 LINC00615Q96LM1 132 aaPredicted RBP7.54□□□□□ -1.2
MSH6-211ENST00000606499 PANX3Q96QZ0 392 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 TSSK1BQ9BXA7 367 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 ZDHHC5Q9C0B5 715 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 COG4Q9H9E3 785 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 SPATS2LQ9NUQ6 558 aaKnown RBP7.54□□□□□ -1.2
MSH6-211ENST00000606499 TRNAU1APQ9NX07 287 aaKnown RBP7.54□□□□□ -1.2
MSH6-211ENST00000606499 EURLQ9NYK6 297 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 TAS2R13Q9NYV9 303 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 TBC1D29Q9UFV1 150 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 FETUBQ9UGM5 382 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 TRMT6Q9UJA5 497 aaKnown RBP7.54□□□□□ -1.2
MSH6-211ENST00000606499 ZNF180Q9UJW8 692 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 PSMD13Q9UNM6 376 aa7.54□□□□□ -1.2
MSH6-211ENST00000606499 RUVBL2Q9Y230 463 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms