RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 PNPLA3Q9NST1 481 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 TMEM9Q9P0T7 183 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 UXTQ9UBK9 157 aaPredicted RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 IPO11Q9UI26 975 aaKnown RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 ENPP5Q9UJA9 477 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 TINAGQ9UJW2 476 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 CNOT11Q9UKZ1 510 aaKnown RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 KLHL20Q9Y2M5 609 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 GDAQ9Y2T3 454 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 SRPRBQ9Y5M8 271 aaKnown RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 TRPV2Q9Y5S1 764 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 ARAP2Q8WZ64 1704 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 A0A1W2PRG6 482 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 HMX3A6NHT5 357 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 LINC00587B1AMM8 73 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 PER2O15055 1255 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 NKRFO15226 690 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 GAS2O43903 313 aaKnown RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 VNN1O95497 513 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 ERVK-10P10266 1014 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 OSMP13725 252 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 NPR1P16066 1061 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 ADRA1DP25100 572 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 HLA-FP30511 346 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 STAT5AP42229 794 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 PTGER3P43115 390 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 CAPZA2P47755 286 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 RAD23AP54725 363 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 ARF3P61204 181 aaPredicted RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 ARF1P84077 181 aaKnown RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 UBE3AQ05086 875 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 CLCQ05315 142 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 MAPK7Q13164 816 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 ALX1Q15699 326 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 HSF5Q4G112 596 aaPredicted RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 ATAD3CQ5T2N8 411 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 ATF7IP2Q5U623 682 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 KCTD11Q693B1 232 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 SLC9A4Q6AI14 798 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 LILRA6Q6PI73 481 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 HFE2Q6ZVN8 426 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 CENPUQ71F23 418 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 PLEKHH3Q7Z736 793 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 MOGAT3Q86VF5 341 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 SNX29P2Q8IUI4 249 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 PRSS58Q8IYP2 241 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 DENND6BQ8NEG7 585 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 CCDC124Q96CT7 223 aaKnown RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 CALML4Q96GE6 196 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 MSANTD3Q96H12 275 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 SH3YL1Q96HL8 342 aaPredicted RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 CNPY3Q9BT09 278 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 SF3B5Q9BWJ5 86 aaKnown RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 NFKBIZQ9BYH8 718 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 GPR62Q9BZJ7 368 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 TINAGL1Q9GZM7 467 aaPredicted RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 NMUR2Q9GZQ4 415 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 TMEM168Q9H0V1 697 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 TMEM245Q9H330 911 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 BOLA2Q9H3K6 86 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 NANOGQ9H9S0 305 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 POLE4Q9NR33 117 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 KCND2Q9NZV8 630 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 REV1Q9UBZ9 1251 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 TLK1Q9UKI8 766 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 PSMD13Q9UNM6 376 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 RNF11Q9Y3C5 154 aa4.68□□□□□ -1.66
LINC01109-201ENST00000603837 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 SF3B1O75533 1304 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC01109-201ENST00000603837 AGAP14A8MT82 685 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 NUPL2O15504 423 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PSIP1O75475 530 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PSMD10O75832 226 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 KRT37O76014 449 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PF4P02776 101 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 TXNP10599 105 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PSKH1P11801 424 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 IFI30P13284 250 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 IFNAR1P17181 557 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CA4P22748 312 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 MMP8P22894 467 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CCR10P46092 362 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 JAM2P57087 298 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 IFITM3Q01628 133 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 IL24Q13007 206 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ART3Q13508 389 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ADGRE1Q14246 886 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ARHGAP19Q14CB8 494 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ARHGEF16Q5VV41 709 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 KANK2Q63ZY3 851 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ATG16L1Q676U5 607 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PRR23BQ6ZRT6 265 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 KCNK18Q7Z418 384 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ADAT2Q7Z6V5 191 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 MICU3Q86XE3 530 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SYNE4Q8N205 404 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 KDM1BQ8NB78 822 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SHKBP1Q8TBC3 707 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF596Q8TC21 504 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms