RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 NUDCD3Q8IVD9 361 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 RASGEF1AQ8N9B8 481 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 NMRAL1Q9HBL8 299 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 ACSS2Q9NR19 701 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 FZD4Q9ULV1 537 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 SUFUQ9UMX1 484 aa17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 PCYT1BQ9Y5K3 369 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-207ENST00000602716 CAPN14A8MX76 684 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 E5RI56 91 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 G3V2L1 256 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 BIRC5O15392 142 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 SNNO75324 88 aaPredicted RBP17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 SLC25A14O95258 325 aaPredicted RBP17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 PAK4O96013 591 aaPredicted RBP17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 LTA4HP09960 611 aaKnown RBP17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 CD1DP15813 335 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 PXNP49023 591 aaPredicted RBP17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 TECRLQ5HYJ1 363 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 ZCCHC23Q6ZST2 131 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 USP30Q70CQ3 517 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 FRMD1Q8N878 549 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 TP53I13Q8NBR0 393 aaPredicted RBP17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 SCYL1Q96KG9 808 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 ASB2Q96Q27 587 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 TTC1Q99614 292 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 POPDC3Q9HBV1 291 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 ARMCX1Q9P291 453 aa17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 TRMT6Q9UJA5 497 aaKnown RBP17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 MRPS17Q9Y2R5 130 aaKnown RBP17.08■□□□□ 0.33
PPFIA3-207ENST00000602716 TBC1D3DA0A087WVF3 549 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TBC1D3IA0A087WXS9 549 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TBC1D3EA0A087X179 549 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TBC1D3KA0A087X1G2 549 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TBC1D3FA6NER0 549 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TARM1B6A8C7 271 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TBC1D3LB9A6J9 549 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 BPGMP07738 259 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TBC1D3HP0C7X1 549 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 ATP1B2P14415 290 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 ATP6V1C1P21283 382 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 GCKP35557 465 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 KCNC1P48547 511 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 DGKEP52429 567 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TBC1D3GQ6DHY5 549 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TBC1D3CQ6IPX1 549 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 PHYKPLQ8IUZ5 450 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TBC1D3Q8IZP1 549 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 PGBD3Q8N328 593 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 PJA1Q8NG27 643 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 MCUR1Q96AQ8 359 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 MOCOSQ96EN8 888 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 LGR4Q9BXB1 951 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 C1QTNF2Q9BXJ5 285 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 TPSD1Q9BZJ3 242 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 USP36Q9P275 1121 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 SCML1Q9UN30 329 aa17.08■□□□□ 0.32
PPFIA3-207ENST00000602716 NEMP2A6NFY4 417 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 TMEM202A6NGA9 273 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 SMNDC1O75940 238 aaKnown RBP eCLIP17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 PDGFBP01127 241 aaPredicted RBP17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 COL6A2P12110 1019 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 TFEBP19484 476 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 IGFALSP35858 605 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 PPARGP37231 505 aaPredicted RBP17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 KPNB1Q14974 876 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 OR4D1Q15615 310 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 ACSBG2Q5FVE4 666 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 PIWIL4Q7Z3Z4 852 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 KBTBD6Q86V97 674 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 HEATR4Q86WZ0 1026 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 HORMAD1Q86X24 394 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 C10orf107Q8IVU9 208 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 RAVER1Q8IY67 606 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 UBALD2Q8IYN6 164 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 GJD3Q8N144 294 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 SYNPOQ8N3V7 929 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 TEX9Q8N6V9 391 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 EEF1AKMT1Q8WVE0 214 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 LINGO1Q96FE5 620 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 SHDQ96IW2 340 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 WWP1Q9H0M0 922 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 ALG9Q9H6U8 611 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 ZNF395Q9H8N7 513 aaPredicted RBP17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 POLMQ9NP87 494 aaPredicted RBP17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 COPG2Q9UBF2 871 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 STOML1Q9UBI4 398 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 CYP8B1Q9UNU6 501 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 CA5BQ9Y2D0 317 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 OR1A2Q9Y585 309 aa17.07■□□□□ 0.32
PPFIA3-207ENST00000602716 NPEPPSL1A6NEC2 478 aa17.06■□□□□ 0.32
PPFIA3-207ENST00000602716 DCNP07585 359 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-207ENST00000602716 MSH3P20585 1137 aa17.06■□□□□ 0.32
PPFIA3-207ENST00000602716 CCR7P32248 378 aa17.06■□□□□ 0.32
PPFIA3-207ENST00000602716 RPS21P63220 83 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-207ENST00000602716 KIAA1161Q6NSJ0 714 aa17.06■□□□□ 0.32
PPFIA3-207ENST00000602716 PNCKQ6P2M8 343 aa17.06■□□□□ 0.32
PPFIA3-207ENST00000602716 TREML1Q86YW5 311 aa17.06■□□□□ 0.32
PPFIA3-207ENST00000602716 TSTD1Q8NFU3 115 aa17.06■□□□□ 0.32
PPFIA3-207ENST00000602716 DCUN1D1Q96GG9 259 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms