RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 GAPDHSO14556 408 aaPredicted RBP11.54□□□□□ -0.56
VRK3-223ENST00000601341 PHGDHO43175 533 aaKnown RBP11.54□□□□□ -0.56
VRK3-223ENST00000601341 KLHL41O60662 606 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 CHRNGP07510 517 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 PRSS56P0CW18 603 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 MPSTP25325 297 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 DCDC1P59894 354 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 CUL3Q13618 768 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 ACAP2Q15057 778 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 CHRNA6Q15825 494 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 TMEM52BQ4KMG9 183 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 ZNF789Q5FWF6 425 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 PIP5KL1Q5T9C9 394 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 LYPLAL1Q5VWZ2 237 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 Q6ZVL8 140 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 HSD11B1LQ7Z5J1 315 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 SLC41A1Q8IVJ1 513 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 LSMEM2Q8N112 164 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 SYNPOQ8N3V7 929 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 CEP70Q8NHQ1 597 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 UBXN10Q96LJ8 280 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 TRAPPC9Q96Q05 1148 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 OR52B2Q96RD2 323 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 MKRN2Q9H000 416 aaKnown RBP11.54□□□□□ -0.56
VRK3-223ENST00000601341 FAM83DQ9H4H8 585 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 EFCAB1Q9HAE3 211 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 NFKBIL1Q9UBC1 381 aaPredicted RBP11.54□□□□□ -0.56
VRK3-223ENST00000601341 FBXL21Q9UKT6 434 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 MMP17Q9ULZ9 603 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 SCML1Q9UN30 329 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 ITM2BQ9Y287 266 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 CRYL1Q9Y2S2 319 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 TCF20Q9UGU0 1960 aaKnown RBP11.54□□□□□ -0.56
VRK3-223ENST00000601341 TRBV5-4A0A0C4DH59 114 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 DPPA5A6NC42 116 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 SPINT1O43278 529 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 AP1G1O43747 822 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 DNTTP04053 509 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 LTA4HP09960 611 aaKnown RBP11.54□□□□□ -0.56
VRK3-223ENST00000601341 SAT1P21673 171 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 DRD3P35462 400 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 ETV3P41162 512 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 PTGER3P43115 390 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 CDKN1CP49918 316 aaPredicted RBP11.54□□□□□ -0.56
VRK3-223ENST00000601341 INHBCP55103 352 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 TAS2R39P59534 338 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 NFKB2Q00653 900 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 SFSWAPQ12872 951 aaKnown RBP11.54□□□□□ -0.56
VRK3-223ENST00000601341 CDC16Q13042 620 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 ACOX1Q15067 660 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 MAPRE2Q15555 327 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 TECRLQ5HYJ1 363 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 TMEM154Q6P9G4 183 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 IZUMO2Q6UXV1 221 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.54□□□□□ -0.56
VRK3-223ENST00000601341 CHSY3Q70JA7 882 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 TECPR1Q7Z6L1 1165 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 CACUL1Q86Y37 369 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 PDSS2Q86YH6 399 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 CEP97Q8IW35 865 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 KBTBD2Q8IY47 623 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 NRSN1Q8IZ57 195 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 HDDC3Q8N4P3 179 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 AADATQ8N5Z0 425 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 PNPLA1Q8N8W4 532 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 CATSPER1Q8NEC5 780 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 LPGAT1Q92604 370 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 ELMO2Q96JJ3 720 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 ASB2Q96Q27 587 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 OMDQ99983 421 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 WRAP53Q9BUR4 548 aaKnown RBP11.54□□□□□ -0.56
VRK3-223ENST00000601341 KLHL4Q9C0H6 718 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 POPDC3Q9HBV1 291 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 ZDHHC2Q9UIJ5 367 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 CRLS1Q9UJA2 301 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 VWA7Q9Y334 891 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 FADS3Q9Y5Q0 445 aa11.54□□□□□ -0.56
VRK3-223ENST00000601341 UBA6A0AVT1 1052 aaPredicted RBP11.53□□□□□ -0.56
VRK3-223ENST00000601341 CCDC189A1A4V9 331 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 AGAP14A8MT82 685 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 WNT9AO14904 365 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 TSPAN6O43657 245 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 RNASEH2AO75792 299 aaKnown RBP11.53□□□□□ -0.56
VRK3-223ENST00000601341 IPO13O94829 963 aaKnown RBP11.53□□□□□ -0.56
VRK3-223ENST00000601341 WISP3O95389 354 aaPredicted RBP11.53□□□□□ -0.56
VRK3-223ENST00000601341 CHRNB1P11230 501 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 UGT1A6P19224 532 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 COL9A1P20849 921 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 UGT1A1P22309 533 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 UGT1A4P22310 534 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 UGT1A3P35503 534 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 UGT1A5P35504 534 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 ADARP55265 1226 aaKnown RBP11.53□□□□□ -0.56
VRK3-223ENST00000601341 NAA20P61599 178 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 LRRC32Q14392 662 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 ZNF284Q2VY69 593 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 PIGGQ5H8A4 983 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 AGBL4Q5VU57 503 aa11.53□□□□□ -0.56
VRK3-223ENST00000601341 OR52E8Q6IFG1 317 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms