RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 ZRANB3Q5FWF4 1079 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 PACS1Q6VY07 963 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 GSTA5Q7RTV2 222 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 ARHGAP22Q7Z5H3 698 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 PDZD3Q86UT5 571 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 PLXDC1Q8IUK5 500 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 PIANPQ8IYJ0 282 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 ANP32BQ92688 251 aaKnown RBP16.84■□□□□ 0.29
HERC3-214ENST00000601319 NAP1L3Q99457 506 aaPredicted RBP16.84■□□□□ 0.29
HERC3-214ENST00000601319 FAM96AQ9H5X1 160 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 VPS37BQ9H9H4 285 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 OGFRQ9NZT2 677 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 PCDHGA3Q9Y5H0 932 aa16.84■□□□□ 0.29
HERC3-214ENST00000601319 PRAMEF33A0A0G2JMD5 474 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 B4E171 279 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.83■□□□□ 0.28
HERC3-214ENST00000601319 TOX3O15405 576 aaPredicted RBP16.83■□□□□ 0.28
HERC3-214ENST00000601319 PRAMEF10O60809 474 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 UBXN7O94888 489 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 AP2A2O94973 939 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 SLC35G4P0C7Q5 338 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 PBLDP30039 288 aaPredicted RBP16.83■□□□□ 0.28
HERC3-214ENST00000601319 FOXN2P32314 431 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 CSTF2P33240 577 aaKnown RBP eCLIP16.83■□□□□ 0.28
HERC3-214ENST00000601319 TSPAN7P41732 249 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 MAPK9P45984 424 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 CDKN1CP49918 316 aaPredicted RBP16.83■□□□□ 0.28
HERC3-214ENST00000601319 ARSDP51689 593 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 RPE65Q16518 533 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 DBN1Q16643 649 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 CYP1B1Q16678 543 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 ZNF658BQ4V348 819 aaPredicted RBP16.83■□□□□ 0.28
HERC3-214ENST00000601319 CCDC38Q502W7 563 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 TSTD2Q5T7W7 516 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 BROXQ5VW32 411 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 AFTPHQ6ULP2 937 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 JAMLQ86YT9 394 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 BMPERQ8N8U9 685 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 GPR150Q8NGU9 434 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 NCSTNQ92542 709 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 SGSM3Q96HU1 749 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 DDA1Q9BW61 102 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 RAB33BQ9H082 229 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 PRORYQ9H606 182 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 TCAF1Q9Y4C2 921 aa16.83■□□□□ 0.28
HERC3-214ENST00000601319 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.82■□□□□ 0.28
HERC3-214ENST00000601319 CCDC162PA2VCL2 907 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 C9orf172C9J069 976 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 PGRMC1O00264 195 aaKnown RBP16.82■□□□□ 0.28
HERC3-214ENST00000601319 QSOX1O00391 747 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 CES2O00748 559 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 KLK10O43240 276 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 KIF5CO60282 957 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 LIPCP11150 499 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 FGF3P11487 239 aaPredicted RBP16.82■□□□□ 0.28
HERC3-214ENST00000601319 CCL4P13236 92 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 TPSB2P20231 275 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 MPSTP25325 297 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 NSG1P42857 185 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 MAGEA6P43360 314 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 KCNJ1P48048 391 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 PPM1FP49593 454 aaPredicted RBP16.82■□□□□ 0.28
HERC3-214ENST00000601319 MAPK10P53779 464 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 TMPRSS3P57727 454 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 RAB15P59190 212 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 BASP1P80723 227 aaKnown RBP16.82■□□□□ 0.28
HERC3-214ENST00000601319 CLN3Q13286 438 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 TPSAB1Q15661 275 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 TMEM164Q5U3C3 297 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 ARMC3Q5W041 872 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 TAS2R42Q7RTR8 314 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 SLC35F6Q8N357 371 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 PPHLN1Q8NEY8 458 aaKnown RBP16.82■□□□□ 0.28
HERC3-214ENST00000601319 ZFPM2Q8WW38 1151 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 USP7Q93009 1102 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 CCM2Q9BSQ5 444 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 IL22Q9GZX6 179 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 WWP1Q9H0M0 922 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 EPHA6Q9UF33 1036 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 PSMD13Q9UNM6 376 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 KALRNO60229 2985 aa16.82■□□□□ 0.28
HERC3-214ENST00000601319 CCDC78A2IDD5 438 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 PRSS56P0CW18 603 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 RPA4Q13156 261 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 LYPLAL1Q5VWZ2 237 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 CAPRIN2Q6IMN6 1127 aaKnown RBP16.81■□□□□ 0.28
HERC3-214ENST00000601319 ACTRT1Q8TDG2 376 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 NAT14Q8WUY8 206 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 SNRNP27Q8WVK2 155 aaKnown RBP16.81■□□□□ 0.28
HERC3-214ENST00000601319 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.81■□□□□ 0.28
HERC3-214ENST00000601319 CRELD1Q96HD1 420 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 NAF1Q96HR8 494 aaKnown RBP16.81■□□□□ 0.28
HERC3-214ENST00000601319 C9orf72Q96LT7 481 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 RMDN2Q96LZ7 410 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 TAAR9Q96RI9 348 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 OSBPL9Q96SU4 736 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 COG4Q9H9E3 785 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 IMP3Q9NV31 184 aaKnown RBP16.81■□□□□ 0.28
HERC3-214ENST00000601319 FOXJ2Q9P0K8 574 aa16.81■□□□□ 0.28
HERC3-214ENST00000601319 GFERP55789 205 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms