RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TLCD2A6NGC4 264 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 C3orf70A6NLC5 250 aaPredicted RBP5.96□□□□□ -1.46
VRK3-220ENST00000600259 H3BMH7 237 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 MYO1FO00160 1098 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 ZNF185O15231 689 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 SGTAO43765 313 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 DPM1O60762 260 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 CPNE3O75131 537 aaKnown RBP5.96□□□□□ -1.46
VRK3-220ENST00000600259 SCRG1O75711 98 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 KLF7O75840 302 aaPredicted RBP5.96□□□□□ -1.46
VRK3-220ENST00000600259 MTA2O94776 668 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 TMEM63AO94886 807 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 PROSCO94903 275 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 LCA5LO95447 670 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 NDST3O95803 873 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 MT-CYBP00156 380 aaPredicted RBP5.96□□□□□ -1.46
VRK3-220ENST00000600259 MX2P20592 715 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 KDELR1P24390 212 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 CD68P34810 354 aaPredicted RBP5.96□□□□□ -1.46
VRK3-220ENST00000600259 HMGCLP35914 325 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 PBX1P40424 430 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 KPNA2P52292 529 aaKnown RBP5.96□□□□□ -1.46
VRK3-220ENST00000600259 VAV2P52735 878 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 TUBB4BP68371 445 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 ABRQ12979 859 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 TUBB2AQ13885 445 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 NFE2L1Q14494 772 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 NOMO1Q15155 1222 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 HADHQ16836 314 aaKnown RBP5.96□□□□□ -1.46
VRK3-220ENST00000600259 FIGNQ5HY92 759 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 C1QL3Q5VWW1 255 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 ZNF385CQ66K41 422 aaPredicted RBP5.96□□□□□ -1.46
VRK3-220ENST00000600259 SLC9A4Q6AI14 798 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 CYB5D1Q6P9G0 228 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 TMEM220Q6QAJ8 160 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 KDELC1Q6UW63 502 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 FAM198BQ6UWH4 519 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 SPOCD1Q6ZMY3 1216 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 NT5DC3Q86UY8 548 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 AMZ2Q86W34 360 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 HPS6Q86YV9 775 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 TMEM151BQ8IW70 566 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 CARFQ8N187 725 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 ENDOVQ8N8Q3 282 aaKnown RBP5.96□□□□□ -1.46
VRK3-220ENST00000600259 KCTD6Q8NC69 237 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 CCNYQ8ND76 341 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 OR8K5Q8NH50 307 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 PRR7Q8TB68 274 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 BRSK1Q8TDC3 778 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 ZFPM2Q8WW38 1151 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 SYN2Q92777 582 aaPredicted RBP5.96□□□□□ -1.46
VRK3-220ENST00000600259 INPP5DQ92835 1189 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 MR1Q95460 341 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 OLFM3Q96PB7 478 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 TUBB2BQ9BVA1 445 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 NLNQ9BYT8 704 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 CEP41Q9BYV8 373 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 GPR63Q9BZJ6 419 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 GLOD4Q9HC38 313 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 BPIFA1Q9NP55 256 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 PCMTD2Q9NV79 361 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 ASF1BQ9NVP2 202 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 HRASLS2Q9NWW9 162 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 TCFL5Q9UL49 500 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 PSMD13Q9UNM6 376 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 NTNG1Q9Y2I2 539 aa5.96□□□□□ -1.46
VRK3-220ENST00000600259 OR6C74A6NCV1 312 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 MGAT4DA6NG13 374 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 A6NL46 340 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 ZNF487B1APH4 448 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 DDX3YO15523 660 aaKnown RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 GPR39O43194 453 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 ZBTB11O95625 1053 aaPredicted RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 EPOP01588 193 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 MSL3P1P0C860 447 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 MTHFD1P11586 935 aaKnown RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 VARSP26640 1264 aaKnown RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 HALP42357 657 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 SOX8P57073 446 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 GSDMDP57764 484 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 PDE1BQ01064 536 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 NR6A1Q15406 480 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 STX1AQ16623 288 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 TEX44Q53QW1 395 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 DUS1LQ6P1R4 473 aaKnown RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 ALKBH5Q6P6C2 394 aaKnown RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 KLHL35Q6PF15 583 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 SASS6Q6UVJ0 657 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 IGFL3Q6UXB1 125 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 NPNTQ6UXI9 565 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 MED25Q71SY5 747 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 B4GALNT4Q76KP1 1039 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 TRAPPC5Q8IUR0 188 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 MAP7D3Q8IWC1 876 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 RHOT1Q8IXI2 618 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 CISD2Q8N5K1 135 aaKnown RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 LILRA3Q8N6C8 439 aaPredicted RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 TMEM102Q8N9M5 508 aaPredicted RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 DDHD1Q8NEL9 900 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 OR1L3Q8NH93 324 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms