RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 CENPUQ71F23 418 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 B3GNT8Q7Z7M8 397 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 ZNF761Q86XN6 746 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 UNC5BQ8IZJ1 945 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 Q8N9G6 341 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 SPDYE1Q8NFV5 336 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 ZNF669Q96BR6 464 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 RMDN2Q96LZ7 410 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 CCM2Q9BSQ5 444 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 TRIM31Q9BZY9 425 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 OR52A5Q9H2C5 316 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 COG4Q9H9E3 785 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 OGFRQ9NZT2 677 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 ATXN7L1Q9ULK2 861 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 TEX264Q9Y6I9 313 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 USP24Q9UPU5 2620 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 KLHL33A6NCF5 533 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 EFCAB8A8MWE9 144 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 D6RAR5 112 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 E7ESA3 106 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 TUBB4AP04350 444 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 F7P08709 466 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 VCLP18206 1134 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 TRADDQ15628 312 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 RPE65Q16518 533 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 WHAMMP3Q1A5X7 153 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 ISXQ2M1V0 245 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 ZNF789Q5FWF6 425 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 CASC4Q6P4E1 433 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 SLITRK4Q8IW52 837 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 WDR48Q8TAF3 677 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 LPGAT1Q92604 370 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 TRIM44Q96DX7 344 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 STAMBPL1Q96FJ0 436 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 BIRC8Q96P09 236 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 INSM2Q96T92 566 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 EBNA1BP2Q99848 306 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 WWP1Q9H0M0 922 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 UCK1Q9HA47 277 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 SLC40A1Q9NP59 571 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 PSMD13Q9UNM6 376 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 ENTPD2Q9Y5L3 495 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 RPS6KL1Q9Y6S9 549 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 FAM169AQ9Y6X4 670 aa19.1■□□□□ 0.65
SHKBP1-221ENST00000599833 SLC5A10A0PJK1 596 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 RHPN2P1A8MT19 583 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 PDZK1P1A8MUH7 402 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 SMAPO00193 183 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 CSO75390 466 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 SLC2A4P14672 509 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 PDHA2P29803 388 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 ZFP36L1Q07352 338 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 CTSL3PQ5NE16 218 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 RBM44Q6ZP01 1051 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 SLC9B2Q86UD5 537 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 CILP2Q8IUL8 1156 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 CFAP206Q8IYR0 622 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 SEC14L1Q92503 715 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 NUDT22Q9BRQ3 303 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 WHRNQ9P202 907 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 ACSL5Q9ULC5 683 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 CDYLQ9Y232 598 aa19.09■□□□□ 0.65
SHKBP1-221ENST00000599833 APC2O95996 2303 aa19.08■□□□□ 0.65
SHKBP1-221ENST00000599833 PMS2P1A4D2B8 440 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 LILRA5A6NI73 299 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 IQCF5A8MTL0 148 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 C1QTNF9BB2RNN3 333 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 KIF2AO00139 706 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 C1QTNF9P0C862 333 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 HOXB3P14651 431 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 JUPP14923 745 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 PGAM1P18669 254 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 OGNP20774 298 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 RPS3P23396 243 aaKnown RBP eCLIP19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 CCR7P32248 378 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 TTPAP49638 278 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 CKAP4Q07065 602 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 CRYMQ14894 314 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 FASTKD3Q14CZ7 662 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 NKAIN2Q5VXU1 208 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 STEAP4Q687X5 459 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 NEPROQ6NW34 567 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 DUS1LQ6P1R4 473 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 ZDHHC24Q6UX98 284 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 NAPRTQ6XQN6 538 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 MAATS1Q7Z4T9 603 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 ZNF592Q92610 1267 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 PRR11Q96HE9 360 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 DEPDC7Q96QD5 511 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 GFM1Q96RP9 751 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 TBC1D10AQ9BXI6 508 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 ABCG4Q9H172 646 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 DPH5Q9H2P9 285 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 EPB41L5Q9HCM4 733 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 POT1Q9NUX5 634 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 TMEM9Q9P0T7 183 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 SAMD15Q9P1V8 674 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 ANAPC5Q9UJX4 755 aa19.08■□□□□ 0.64
SHKBP1-221ENST00000599833 MAD1L1Q9Y6D9 718 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms