RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ZDHHC12Q96GR4 267 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 OR6C1Q96RD1 312 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 FERMT1Q9BQL6 677 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 WDR37Q9Y2I8 494 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
PNKP-213ENST00000599543 OR2AG2A6NM03 316 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 NKX2-8O15522 239 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 UGT1A9O60656 530 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 UGT1A6P19224 532 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 UGT1A1P22309 533 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 UGT1A4P22310 534 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 AKT1P31749 480 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 STAT5AP42229 794 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 SH3BP2P78314 561 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 MC1RQ01726 317 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 DMPKQ09013 629 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 CDC20Q12834 499 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 XRCC4Q13426 336 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 MAP7Q14244 749 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 IL11RAQ14626 422 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 GPRC6AQ5T6X5 926 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 CACHD1Q5VU97 1274 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 ITPRIPL1Q6GPH6 555 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 DARS2Q6PI48 645 aaKnown RBP18.36■□□□□ 0.53
PNKP-213ENST00000599543 FAM92BQ6ZTR7 304 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 PRSS42Q7Z5A4 293 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 RASGRP3Q8IV61 690 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 RASGEF1AQ8N9B8 481 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 STARD8Q92502 1023 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 GBA3Q9H227 469 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 UGT1A7Q9HAW7 530 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 UGT1A10Q9HAW8 530 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 UGT1A8Q9HAW9 530 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 TUBD1Q9UJT1 453 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 EFR3BQ9Y2G0 817 aa18.36■□□□□ 0.53
PNKP-213ENST00000599543 UBR5O95071 2799 aaPredicted RBP18.36■□□□□ 0.53
PNKP-213ENST00000599543 STX7O15400 261 aaKnown RBP18.35■□□□□ 0.53
PNKP-213ENST00000599543 SUV39H1O43463 412 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 KIF1CO43896 1103 aaKnown RBP18.35■□□□□ 0.53
PNKP-213ENST00000599543 POP7O75817 140 aaKnown RBP18.35■□□□□ 0.53
PNKP-213ENST00000599543 ANXA9O76027 345 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 RBP3P10745 1247 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 CTSCP53634 463 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 GEMP55040 296 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 KLF1Q13351 362 aaPredicted RBP18.35■□□□□ 0.53
PNKP-213ENST00000599543 KCTD19Q17RG1 926 aaPredicted RBP18.35■□□□□ 0.53
PNKP-213ENST00000599543 CYB5D1Q6P9G0 228 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 TMEM220Q6QAJ8 160 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 ELMO2Q96JJ3 720 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 FICDQ9BVA6 458 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 SMOXQ9NWM0 555 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 IL17BQ9UHF5 180 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 PSMD13Q9UNM6 376 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 DNMT3AQ9Y6K1 912 aaPredicted RBP18.35■□□□□ 0.53
PNKP-213ENST00000599543 RPS6KL1Q9Y6S9 549 aa18.35■□□□□ 0.53
PNKP-213ENST00000599543 GAPDHSO14556 408 aaPredicted RBP18.34■□□□□ 0.53
PNKP-213ENST00000599543 KCNN4O15554 427 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 PRAMEF1O95521 474 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 AGTP01019 485 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 ZNF28P17035 718 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 TCN2P20062 427 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 MSH3P20585 1137 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 PBLDP30039 288 aaPredicted RBP18.34■□□□□ 0.53
PNKP-213ENST00000599543 CSRP3P50461 194 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 PLCL1Q15111 1095 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 LONRF2Q1L5Z9 754 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 FNBP1LQ5T0N5 605 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 KLHL35Q6PF15 583 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 C6orf15Q6UXA7 325 aaPredicted RBP18.34■□□□□ 0.53
PNKP-213ENST00000599543 SLC13A5Q86YT5 568 aaPredicted RBP18.34■□□□□ 0.53
PNKP-213ENST00000599543 GPR150Q8NGU9 434 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 C1orf54Q8WWF1 131 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 RNF31Q96EP0 1072 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 STAMBPL1Q96FJ0 436 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 ZNF514Q96K75 400 aaPredicted RBP18.34■□□□□ 0.53
PNKP-213ENST00000599543 RAB33BQ9H082 229 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 IMP3Q9NV31 184 aaKnown RBP18.34■□□□□ 0.53
PNKP-213ENST00000599543 EPHA6Q9UF33 1036 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 ARL5AQ9Y689 179 aa18.34■□□□□ 0.53
PNKP-213ENST00000599543 HECTD1Q9ULT8 2610 aa18.33■□□□□ 0.53
PNKP-213ENST00000599543 GOLGA6L9A6NEM1 432 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 C2orf81A6NN90 581 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 TERTO14746 1132 aaKnown RBP18.33■□□□□ 0.52
PNKP-213ENST00000599543 CEP104O60308 925 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 STK10O94804 968 aaKnown RBP18.33■□□□□ 0.52
PNKP-213ENST00000599543 LPOP22079 712 aaPredicted RBP18.33■□□□□ 0.52
PNKP-213ENST00000599543 OAS2P29728 719 aaKnown RBP18.33■□□□□ 0.52
PNKP-213ENST00000599543 SNX1Q13596 522 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 NFE2L1Q14494 772 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 RPE65Q16518 533 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 C16orf46Q6P387 395 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 FAM83HQ6ZRV2 1179 aaPredicted RBP18.33■□□□□ 0.52
PNKP-213ENST00000599543 DET1Q7L5Y6 550 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 PPP1R3BQ86XI6 285 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 CDKL3Q8IVW4 592 aaPredicted RBP18.33■□□□□ 0.52
PNKP-213ENST00000599543 TAB3Q8N5C8 712 aaPredicted RBP18.33■□□□□ 0.52
PNKP-213ENST00000599543 GALNT6Q8NCL4 622 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 KLHL6Q8WZ60 621 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 SMARCAL1Q9NZC9 954 aa18.33■□□□□ 0.52
PNKP-213ENST00000599543 LNPEPQ9UIQ6 1025 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms