RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 CCR7P32248 378 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 TBL3Q12788 808 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 RBBP7Q16576 425 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 DET1Q7L5Y6 550 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 PHYKPLQ8IUZ5 450 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 DDIASQ8IXT1 998 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 DCBLD1Q8N8Z6 715 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 DCLRE1BQ9H816 532 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 HPS4Q9NQG7 708 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 PRDM6Q9NQX0 595 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 LATS2Q9NRM7 1088 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 MTX2O75431 263 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 CIB2O75838 187 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 ESRRBO95718 433 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 GUCA1CO95843 209 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 EZRP15311 586 aaKnown RBP16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 ST8SIA6P61647 398 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 PTK2BQ14289 1009 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 GRB7Q14451 532 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 SQLEQ14534 574 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 C1orf146Q5VVC0 180 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 TANGO2Q6ICL3 276 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 DSELQ8IZU8 1212 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 OR52B6Q8NGF0 335 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 OR56A4Q8NGH8 313 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 ULK4Q96C45 1275 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 FAM83DQ9H4H8 585 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 ITM2BQ9Y287 266 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 OARD1Q9Y530 152 aa16.77■□□□□ 0.27
SHKBP1-216ENST00000598201 ANTXRLA6NF34 631 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 TAPBPO15533 448 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 CCNT2O60583 730 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 PSMG1O95456 288 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 ANP32DO95626 131 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 MLYCDO95822 493 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 GNAZP19086 355 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 MTHFRP42898 656 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 ACTR3P61158 418 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 RCN1Q15293 331 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 PCBP2Q15366 365 aaKnown RBP eCLIP16.76■□□□□ 0.276e-9■■■■■ 40.7
SHKBP1-216ENST00000598201 TRMT5Q32P41 509 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 PARS2Q7L3T8 475 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 KYQ8NBH2 561 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 PDPRQ8NCN5 879 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 LRIG1Q96JA1 1093 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 CDK15Q96Q40 435 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 MYCBPQ99417 103 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 NPAS2Q99743 824 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 FAM126AQ9BYI3 521 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 DEC1Q9P2X7 70 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 DKK3Q9UBP4 350 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 POLG2Q9UHN1 485 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 PSMD12O00232 456 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 RAD51BO15315 384 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 OR4F21O95013 312 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 ERVPABLB-1P60509 514 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 NAA20P61599 178 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 FASTKQ14296 549 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 LEXMQ3ZCV2 418 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 AGKQ53H12 422 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 SERPINA13PQ6UXR4 307 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 DPPA4Q7L190 304 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 HPS6Q86YV9 775 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 OR9I1Q8NGQ6 314 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 KCNV2Q8TDN2 545 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 SUSD6Q92537 303 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 ACOX2Q99424 681 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 RIOK2Q9BVS4 552 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 NOL11Q9H8H0 719 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 EBF2Q9HAK2 575 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 KCTD5Q9NXV2 234 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 CCDC167Q9P0B6 97 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 SUN2Q9UH99 717 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 PTBP2Q9UKA9 531 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 PACSIN3Q9UKS6 424 aa16.76■□□□□ 0.27
SHKBP1-216ENST00000598201 GRXCR2A6NFK2 248 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 FADS2P1A8MWK0 482 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 KPNA3O00505 521 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 MBTPS2O43462 519 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 CRCPO75575 148 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 LMNAP02545 664 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 XPAP23025 273 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 MMP12P39900 470 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 DCDC1P59894 354 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 TFF2Q03403 129 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 SMAD4Q13485 552 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 TCHHL1Q5QJ38 904 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 ZNF648Q5T619 568 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 HENMT1Q5T8I9 393 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 LETMD1Q6P1Q0 360 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 SCIMPQ6UWF3 145 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 GPRIN3Q6ZVF9 776 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 GOLGA7Q7Z5G4 137 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 CFAP61Q8NHU2 1237 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 CCDC124Q96CT7 223 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 NECTIN4Q96NY8 510 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 ZNF382Q96SR6 550 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 SMOXQ9NWM0 555 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 GDE1Q9NZC3 331 aa16.75■□□□□ 0.27
SHKBP1-216ENST00000598201 NOP53Q9NZM5 478 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms