RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 TRIM62Q9BVG3 475 aa12.43□□□□□ -0.42
ZNF558-205ENST00000597304 SP140LQ9H930 580 aa12.43□□□□□ -0.42
ZNF558-205ENST00000597304 SIAEQ9HAT2 523 aa12.43□□□□□ -0.42
ZNF558-205ENST00000597304 CATSPERZQ9NTU4 200 aa12.43□□□□□ -0.42
ZNF558-205ENST00000597304 UXTQ9UBK9 157 aaPredicted RBP12.43□□□□□ -0.42
ZNF558-205ENST00000597304 ADGRE2Q9UHX3 823 aa12.43□□□□□ -0.42
ZNF558-205ENST00000597304 PCTPQ9UKL6 214 aa12.43□□□□□ -0.42
ZNF558-205ENST00000597304 CDH9Q9ULB4 789 aa12.43□□□□□ -0.42
ZNF558-205ENST00000597304 RRN3P2A6NIE6 340 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ZBBXA8MT70 800 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 NFKBIEO00221 500 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ARNTLO00327 626 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 STX16O14662 325 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 PTGESO14684 152 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 RHOBTB1O94844 696 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 MOCS2O96007 188 aaPredicted RBP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 PEX11BO96011 259 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 MMP2P08253 660 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 RCVRNP35243 200 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 AGTR2P50052 363 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 PLIN5Q00G26 463 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 RAD51Q06609 339 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 CDC20Q12834 499 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 EIF4EBP2Q13542 120 aaPredicted RBP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 PAQR3Q6TCH7 311 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 AKAP14Q86UN6 197 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ADHFE1Q8IWW8 467 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 OR5K1Q8NHB7 308 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 PSMA8Q8TAA3 256 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 MYLPFQ96A32 169 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ZNF583Q96ND8 569 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ZNF300Q96RE9 604 aaPredicted RBP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 TRIT1Q9H3H1 467 aaKnown RBP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 CSNK1G1Q9HCP0 422 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 VTA1Q9NP79 307 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 UTS2RQ9UKP6 389 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 IKZF3Q9UKT9 509 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 FAM50BQ9Y247 325 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 TMEM98Q9Y2Y6 226 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 UBA6A0AVT1 1052 aaPredicted RBP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 TTC34A8MYJ7 566 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 OGNP20774 298 aaKnown RBP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 PPP5CP53041 499 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 NCS1P62166 190 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ACVR1Q04771 509 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 SLC10A7Q0GE19 358 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 PPP1R8Q12972 351 aaKnown RBP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 PTPRCAPQ14761 206 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 SF3B4Q15427 424 aaKnown RBP eCLIP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 RFX4Q33E94 735 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ATAD3BQ5T9A4 648 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 TXNDC11Q6PKC3 985 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 CCDC81Q6ZN84 652 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 GPRIN3Q6ZVF9 776 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 NANOGNBQ7Z5D8 188 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 BLOC1S5Q8TDH9 187 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 FRS2Q8WU20 508 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 TMEM40Q8WWA1 233 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 FAM162AQ96A26 154 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ZFP42Q96MM3 310 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 C1QTNF3Q9BXJ4 246 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ALOXE3Q9BYJ1 711 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 AGO3Q9H9G7 860 aaKnown RBP12.42□□□□□ -0.42
ZNF558-205ENST00000597304 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ERVK-18Q9QC07 812 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 IFT52Q9Y366 437 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 ARL5AQ9Y689 179 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 GBF1Q92538 1859 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 OTOFQ9HC10 1997 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 PLXNB2O15031 1838 aa12.42□□□□□ -0.42
ZNF558-205ENST00000597304 LCHNA4D1U4 455 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 NPEPPSL1A6NEC2 478 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 A8MU76 341 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 J3KR12 359 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 CDC7O00311 574 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 IFRD1O00458 451 aaPredicted RBP12.41□□□□□ -0.42
ZNF558-205ENST00000597304 ENPP3O14638 875 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 SLC16A6O15403 523 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 RPP40O75818 363 aaKnown RBP12.41□□□□□ -0.42
ZNF558-205ENST00000597304 OR4F21O95013 312 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 CYP11A1P05108 521 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 MMP3P08254 477 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 ATXN1LP0C7T5 689 aaKnown RBP12.41□□□□□ -0.42
ZNF558-205ENST00000597304 PTPN2P17706 415 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 PRKACGP22612 351 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 PSMB9P28065 219 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 MAP2K4P45985 399 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 ALDH7A1P49419 539 aaKnown RBP12.41□□□□□ -0.42
ZNF558-205ENST00000597304 STC1P52823 247 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 DGKQP52824 942 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 IHHQ14623 411 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 LACC1Q8IV20 430 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 CDYL2Q8N8U2 506 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 ZNF548Q8NEK5 533 aaPredicted RBP12.41□□□□□ -0.42
ZNF558-205ENST00000597304 FBLIM1Q8WUP2 373 aa12.41□□□□□ -0.42
ZNF558-205ENST00000597304 FUBP1Q96AE4 644 aaKnown RBP12.41□□□□□ -0.42
ZNF558-205ENST00000597304 REXO5Q96IC2 774 aaKnown RBP12.41□□□□□ -0.42
ZNF558-205ENST00000597304 TXNDC15Q96J42 360 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms