RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CTNNBL1Q8WYA6 563 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 HSPH1Q92598 858 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 ZNF501Q96CX3 271 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 CXorf40BQ96DE9 158 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 CHP1Q99653 195 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 RAB33BQ9H082 229 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 FAM83DQ9H4H8 585 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 ZNF552Q9H707 407 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 ZWILCHQ9H900 591 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 ETNK2Q9NVF9 386 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 ZNHIT6Q9NWK9 470 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 CHKBQ9Y259 395 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 WDR37Q9Y2I8 494 aa13.44□□□□□ -0.26
SHKBP1-208ENST00000595726 H3BRJ5 948 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 MYO1FO00160 1098 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 H2AFZP0C0S5 128 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 ZNF7P17097 686 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 HSPA9P38646 679 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 SPINT3P49223 89 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 TUBB4BP68371 445 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 TUBB2AQ13885 445 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 PTCHD3Q3KNS1 767 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 IGFL3Q6UXB1 125 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 SPOCD1Q6ZMY3 1216 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 H2AFVQ71UI9 128 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 POLNQ7Z5Q5 900 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 ADGRG6Q86SQ4 1221 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 CPNE8Q86YQ8 564 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 DSELQ8IZU8 1212 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 NDUFAF2Q8N183 169 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 ZADH2Q8N4Q0 377 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 GRHL3Q8TE85 626 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 PPM1MQ96MI6 270 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 TUBB2BQ9BVA1 445 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 TRIM5Q9C035 493 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 NHEJ1Q9H9Q4 299 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 PCDH18Q9HCL0 1135 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 NT5MQ9NPB1 228 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 POT1Q9NUX5 634 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 CTTNBP2NLQ9P2B4 639 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 UVRAGQ9P2Y5 699 aa13.43□□□□□ -0.26
SHKBP1-208ENST00000595726 SPTBP11277 2137 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 AKR1B15C9JRZ8 316 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 AKR1B10O60218 316 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 MTX2O75431 263 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 MTA2O94776 668 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 TMEM253P0C7T8 217 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 AMPD1P23109 780 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 ARL4AP40617 200 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 MMP13P45452 471 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 KRTAP10-9P60411 292 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 HSD11B2P80365 405 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 ITKQ08881 620 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 ABRQ12979 859 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 MYBPC3Q14896 1274 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 MARC1Q5VT66 337 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 FAM198BQ6UWH4 519 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 GALNT16Q8N428 558 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 D2HGDHQ8N465 521 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 CLIP3Q96DZ5 547 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 CCDC42Q96M95 316 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 CSPG4P5Q96PW8 444 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 TRIM39Q9HCM9 518 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 SPTLC3Q9NUV7 552 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 ZGRF1Q86YA3 2104 aa13.42□□□□□ -0.26
SHKBP1-208ENST00000595726 UBA6A0AVT1 1052 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 PROSCO94903 275 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 SLC25A14O95258 325 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 PRLP01236 227 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 ALPPP05187 535 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 STSP08842 583 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 FECHP22830 423 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 RORAP35398 523 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 GSDMDP57764 484 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 ART3Q13508 389 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 HIF1AQ16665 826 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 DNTTIP2Q5QJE6 756 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 ALS2CLQ60I27 953 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 ZNF547Q8IVP9 402 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 TMEM151BQ8IW70 566 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 ZNF295-AS1Q8N0V1 137 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 GPR150Q8NGU9 434 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 FAM71BQ8TC56 605 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 LRFN5Q96NI6 719 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 TRIM8Q9BZR9 551 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 RBSNQ9H1K0 784 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 PCMTD2Q9NV79 361 aa13.41□□□□□ -0.26
SHKBP1-208ENST00000595726 MYO7BQ6PIF6 2116 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 C1orf232A0A0U1RR37 186 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 A0A1B0GTL3 188 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 CHUKO15111 745 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 KMOO15229 486 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 LDB2O43679 373 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 CD48P09326 243 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 PTGER4P35408 488 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 GJC1P36383 396 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 SSR1P43307 286 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 ARCN1P48444 511 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 ARSEP51690 589 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms