RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SPATA21Q7Z572 469 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 STAMBPL1Q96FJ0 436 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 FAM96AQ9H5X1 160 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 EVA1BQ9NVM1 165 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 SYBUQ9NX95 663 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 SLC2A6Q9UGQ3 507 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 APOBEC2Q9Y235 224 aaKnown RBP19.33■□□□□ 0.68
LSM4-203ENST00000593829 PLEKHM1Q9Y4G2 1056 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 ST14Q9Y5Y6 855 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 ARID1BQ8NFD5 2236 aaPredicted RBP19.33■□□□□ 0.68
LSM4-203ENST00000593829 CNOT1A5YKK6 2376 aaKnown RBP19.32■□□□□ 0.68
LSM4-203ENST00000593829 TMEM120BA0PK00 339 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 FTH1P19P0C7X4 201 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 CKMT1AP12532 417 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 MSH3P20585 1137 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 IVDP26440 423 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 AKT1P31749 480 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 SLCO1A2P46721 670 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 DUSP3P51452 185 aaPredicted RBP19.32■□□□□ 0.68
LSM4-203ENST00000593829 CCNG1P51959 295 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 CACNG1Q06432 222 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 IZUMO3Q5VZ72 239 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 ARMC3Q5W041 872 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 SLC30A9Q6PML9 568 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 LRRTM4Q86VH4 590 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 NXPE1Q8N323 547 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 AGAP11Q8TF27 550 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 DYDC1Q8WWB3 177 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 HDAC10Q969S8 669 aa19.32■□□□□ 0.68
LSM4-203ENST00000593829 CCDC162PA2VCL2 907 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 TCP11X1B4DZS4 312 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 KMOO15229 486 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 ANP32DO95626 131 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 ACTR1BP42025 376 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 RPIAP49247 311 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 ACTR1AP61163 376 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 N4BP2L1Q5TBK1 243 aaPredicted RBP19.31■□□□□ 0.68
LSM4-203ENST00000593829 CRTC3Q6UUV7 619 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 TAS2R42Q7RTR8 314 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 ERMP1Q7Z2K6 904 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 RELL1Q8IUW5 271 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 KIFC1Q9BW19 673 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 DPEP2Q9H4A9 486 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 MRM3Q9HC36 420 aaKnown RBP19.31■□□□□ 0.68
LSM4-203ENST00000593829 TOR4AQ9NXH8 423 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 TAAR2Q9P1P5 351 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 SIRPGQ9P1W8 387 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 TRBV5-4A0A0C4DH59 114 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 LY6G6EA0A0G2JKS1 128 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 SDR42E2A6NKP2 422 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 TTC4O95801 387 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 RALBP11234 206 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 ACP5P13686 325 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 ACP1P24666 158 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 NR0B2Q15466 257 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 AFTPHQ6ULP2 937 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 SLCO6A1Q86UG4 719 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 TRAPPC5Q8IUR0 188 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 SLC35F3Q8IY50 421 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 ARL10Q8N8L6 244 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 RASGEF1AQ8N9B8 481 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 HEXDCQ8WVB3 486 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 DCUN1D1Q96GG9 259 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 COPS8Q99627 209 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 SPATS2LQ9NUQ6 558 aaKnown RBP19.31■□□□□ 0.68
LSM4-203ENST00000593829 FGFR1OP2Q9NVK5 253 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 GULP1Q9UBP9 304 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 SOX13Q9UN79 622 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 U3KQA8 63 aa19.31■□□□□ 0.68
LSM4-203ENST00000593829 OR51F1A6NGY5 319 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 MYF5P13349 255 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 ACADVLP49748 655 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 CDKN1CP49918 316 aaPredicted RBP19.3■□□□□ 0.68
LSM4-203ENST00000593829 KCNJ2P63252 427 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 PRAMEP78395 509 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 CASC4Q6P4E1 433 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 OGFOD3Q6PK18 319 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 SERPINA9Q86WD7 417 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 ZNF547Q8IVP9 402 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 OR6P1Q8NGX9 317 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 KLHL29Q96CT2 875 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 SNF8Q96H20 258 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 ZNF514Q96K75 400 aaPredicted RBP19.3■□□□□ 0.68
LSM4-203ENST00000593829 MAGEB18Q96M61 343 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 TREX1Q9NSU2 369 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 PCDHGA1Q9Y5H4 931 aa19.3■□□□□ 0.68
LSM4-203ENST00000593829 CFAP99D6REC4 459 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 LIN7AO14910 233 aaPredicted RBP19.29■□□□□ 0.68
LSM4-203ENST00000593829 ACRV1P26436 265 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 NMBRP28336 390 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 MAGEA3P43357 314 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 CCDC157Q569K6 752 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 PIANPQ8IYJ0 282 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 MPP5Q8N3R9 675 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 KYQ8NBH2 561 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 OR4L1Q8NH43 312 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 UHMK1Q8TAS1 419 aaKnown RBP19.29■□□□□ 0.68
LSM4-203ENST00000593829 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.29■□□□□ 0.68
LSM4-203ENST00000593829 TIMM29Q9BSF4 260 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 ZDHHC3Q9NYG2 299 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms