RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 RARRES3Q9UL19 164 aa18.46■□□□□ 0.55
CCDC43-205ENST00000592333 PCDHA13Q9Y5I0 950 aa18.46■□□□□ 0.55
CCDC43-205ENST00000592333 KCNMB2Q9Y691 235 aa18.46■□□□□ 0.55
CCDC43-205ENST00000592333 TLCD2A6NGC4 264 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 KIF1CO43896 1103 aaKnown RBP18.45■□□□□ 0.54
CCDC43-205ENST00000592333 KIAA0754O94854 1291 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 PRAMEF1O95521 474 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 PRKAR1AP10644 381 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 MTHFD1P11586 935 aaKnown RBP18.45■□□□□ 0.54
CCDC43-205ENST00000592333 ZNF28P17035 718 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 CTNNA1P35221 906 aaKnown RBP18.45■□□□□ 0.54
CCDC43-205ENST00000592333 CYLC1P35663 651 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-205ENST00000592333 DEFB109BQ30KR1 87 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 BCL7AQ4VC05 210 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 DAAM2Q86T65 1068 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 SIDT2Q8NBJ9 832 aaKnown RBP18.45■□□□□ 0.54
CCDC43-205ENST00000592333 GALNT6Q8NCL4 622 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 LRRC45Q96CN5 670 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 HAUS1Q96CS2 278 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 ABHD17AQ96GS6 310 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 CCM2Q9BSQ5 444 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 GPR87Q9BY21 358 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 TRIM10Q9UDY6 481 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 CROTQ9UKG9 612 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 POLHQ9Y253 713 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 PCDHA3Q9Y5H8 950 aa18.45■□□□□ 0.54
CCDC43-205ENST00000592333 C17orf113A0A1B0GUU1 675 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 OR5K3A6NET4 321 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 OR2AG2A6NM03 316 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 SRP72O76094 671 aaKnown RBP18.44■□□□□ 0.54
CCDC43-205ENST00000592333 STK10O94804 968 aaKnown RBP18.44■□□□□ 0.54
CCDC43-205ENST00000592333 CRTAMO95727 393 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 RALBP11234 206 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 NDUFS1P28331 727 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 RBL1P28749 1068 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 ADRA1AP35348 466 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 HSD11B2P80365 405 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 NFE2L1Q14494 772 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 PRPSAP1Q14558 356 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 FAM92BQ6ZTR7 304 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 ULK4Q96C45 1275 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 TRIM4Q9C037 500 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 ARNT2Q9HBZ2 717 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 LHX9Q9NQ69 397 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 HEBP2Q9Y5Z4 205 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 COLEC10Q9Y6Z7 277 aa18.44■□□□□ 0.54
CCDC43-205ENST00000592333 IGHV5-51A0A0C4DH38 117 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 CCDC66A2RUB6 948 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 MKRN2OSH3BPM6 223 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 H7C0C1 242 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 PYCARD-AS1I3L0S3 204 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 MATN2O00339 956 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 CREG1O75629 220 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 AGTP01019 485 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 F8A1P23610 371 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 AKT1P31749 480 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 HADHAP40939 763 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 CETN2P41208 172 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 ATP5OP48047 213 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 TUBB3Q13509 450 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 PLCL1Q15111 1095 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 LACTB2Q53H82 288 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-205ENST00000592333 FNBP1LQ5T0N5 605 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 CCDC181Q5TID7 509 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 TCTN3Q6NUS6 607 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 C16orf46Q6P387 395 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 FAM83HQ6ZRV2 1179 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-205ENST00000592333 OOSP2Q86WS3 158 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 CDKL3Q8IVW4 592 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-205ENST00000592333 APLFQ8IW19 511 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-205ENST00000592333 D2HGDHQ8N465 521 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 ASB8Q9H765 288 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 KIR3DX1Q9H7L2 352 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 SYTL2Q9HCH5 934 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 LNPEPQ9UIQ6 1025 aa18.43■□□□□ 0.54
CCDC43-205ENST00000592333 UBA6A0AVT1 1052 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-205ENST00000592333 BTNL10A8MVZ5 291 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 ZBTB11O95625 1053 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-205ENST00000592333 ARL4DP49703 201 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 TUBB4BP68371 445 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 KLRB1Q12918 225 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 TUBB2AQ13885 445 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 LLGL1Q15334 1064 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 GPR33Q49SQ1 333 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 DNTTIP2Q5QJE6 756 aaKnown RBP18.42■□□□□ 0.54
CCDC43-205ENST00000592333 ANKRD20A2Q5SQ80 823 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 ANKRD20A1Q5TYW2 823 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 ANKRD20A3Q5VUR7 823 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 PTRH1Q86Y79 214 aaKnown RBP18.42■□□□□ 0.54
CCDC43-205ENST00000592333 RNF214Q8ND24 703 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 OR4K2Q8NGD2 314 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 GPR150Q8NGU9 434 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 KRT35Q92764 455 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 INSM2Q96T92 566 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-205ENST00000592333 TUBB2BQ9BVA1 445 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 OSBPL8Q9BZF1 889 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 TRIM5Q9C035 493 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 EPN3Q9H201 632 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 GOLPH3Q9H4A6 298 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 LATS2Q9NRM7 1088 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms