RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MARCKSL1P49006 195 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 TLE1Q04724 770 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 FOXM1Q08050 763 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 GPR18Q14330 331 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS4B-207ENST00000591519 SIRPB2Q5JXA9 342 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 KAZNQ674X7 775 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 C6orf15Q6UXA7 325 aaPredicted RBP10.2□□□□□ -0.78
VPS4B-207ENST00000591519 B4GALNT4Q76KP1 1039 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 BPHLQ86WA6 291 aaPredicted RBP10.2□□□□□ -0.78
VPS4B-207ENST00000591519 STARD8Q92502 1023 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 ABHD17AQ96GS6 310 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 SLC41A2Q96JW4 573 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 TGM7Q96PF1 710 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 ULBP3Q9BZM4 244 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 BPIFA1Q9NP55 256 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 UBP1Q9NZI7 540 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 SAE1Q9UBE0 346 aaPredicted RBP10.2□□□□□ -0.78
VPS4B-207ENST00000591519 DNAJC16Q9Y2G8 782 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 WDR37Q9Y2I8 494 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 PCDHGA6Q9Y5G7 932 aa10.2□□□□□ -0.78
VPS4B-207ENST00000591519 OR52A4PA6NMU1 304 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 PSTPIP1O43586 416 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 KIF1CO43896 1103 aaKnown RBP10.19□□□□□ -0.78
VPS4B-207ENST00000591519 SPAG6O75602 509 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 POP7O75817 140 aaKnown RBP10.19□□□□□ -0.78
VPS4B-207ENST00000591519 ZRANB2O95218 330 aaKnown RBP eCLIP10.19□□□□□ -0.78
VPS4B-207ENST00000591519 PECAM1P16284 738 aaPredicted RBP10.19□□□□□ -0.78
VPS4B-207ENST00000591519 ZNF28P17035 718 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 NELFEP18615 380 aaKnown RBP10.19□□□□□ -0.78
VPS4B-207ENST00000591519 CAPZBP47756 277 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 DRG2P55039 364 aaKnown RBP10.19□□□□□ -0.78
VPS4B-207ENST00000591519 ADCY2Q08462 1091 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 GTF2H3Q13889 308 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 SLC1A5Q15758 541 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 CHRNA6Q15825 494 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 SEPT7Q16181 437 aaKnown RBP10.19□□□□□ -0.78
VPS4B-207ENST00000591519 PLA2G4EQ3MJ16 856 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 TFDP3Q5H9I0 405 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 LDLRAP1Q5SW96 308 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 CACHD1Q5VU97 1274 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 METRNLQ641Q3 311 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 CYB5D1Q6P9G0 228 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 SPOCD1Q6ZMY3 1216 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 PID1Q7Z2X4 250 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 AMZ2Q86W34 360 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 PTRH1Q86Y79 214 aaKnown RBP10.19□□□□□ -0.78
VPS4B-207ENST00000591519 CCDC50Q8IVM0 306 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 RCOR2Q8IZ40 523 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 LINC00528Q8N1L1 170 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 RASGEF1AQ8N9B8 481 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 DDHD1Q8NEL9 900 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 ZFPM2Q8WW38 1151 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 RSC1A1Q92681 617 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 KRT35Q92764 455 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 P3H4Q92791 437 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 CXorf40BQ96DE9 158 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 TTC25Q96NG3 672 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 OR6C1Q96RD1 312 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 SMOXQ9NWM0 555 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 KCND3Q9UK17 655 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 TRHDEQ9UKU6 1024 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 PADI1Q9ULC6 663 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 KCTD3Q9Y597 815 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 KCNMB2Q9Y691 235 aa10.19□□□□□ -0.78
VPS4B-207ENST00000591519 KLHL33A6NCF5 533 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 CYSRT1A8MQ03 144 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 HACD1B0YJ81 288 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 GAPDHSO14556 408 aaPredicted RBP10.18□□□□□ -0.78
VPS4B-207ENST00000591519 PJA2O43164 708 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 UGT1A9O60656 530 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 RASSF9O75901 435 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 SLC4A1P02730 911 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 MT-ND3P03897 115 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 PRKAR1AP10644 381 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 UGT1A6P19224 532 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 NFKB1P19838 968 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 HLA-DPA1P20036 260 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 UGT1A1P22309 533 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 UGT1A4P22310 534 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 CA5AP35218 305 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 DLSTP36957 453 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 SPAM1P38567 509 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 HALP42357 657 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 CHRNA4P43681 627 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 SEPHS1P49903 392 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 KIF5AQ12840 1032 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 MPP3Q13368 585 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 XRCC4Q13426 336 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 ITGA9Q13797 1035 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 RPE65Q16518 533 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 DEFB109BQ30KR1 87 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 COLEC12Q5KU26 742 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 C11orf63Q6NUN7 778 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 KLHL35Q6PF15 583 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 TMEM220Q6QAJ8 160 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 PPP1R3BQ86XI6 285 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 KMT5CQ86Y97 462 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 TRAPPC5Q8IUR0 188 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 LRRC8AQ8IWT6 810 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms