RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 EPHA4P54764 986 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 INHBCP55103 352 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 UBE2IP63279 158 aaKnown RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 CFHR1Q03591 330 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 SQSTM1Q13501 440 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 SEMA5AQ13591 1074 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 KIR2DS5Q14953 304 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 C3orf38Q5JPI3 329 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 XKR5Q6UX68 686 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 WASH2PQ6VEQ5 465 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 ZNF574Q6ZN55 896 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 LSMEM2Q8N112 164 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 TAB3Q8N5C8 712 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 GOLGA6L1Q8N7Z2 621 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 WDR36Q8NI36 951 aaKnown RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 GDAP1Q8TB36 358 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 LRRC45Q96CN5 670 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 CCDC97Q96F63 343 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 DNAJC1Q96KC8 554 aaKnown RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 ZNF578Q96N58 590 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 TMEM74Q96NL1 305 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 KRTAP4-12Q9BQ66 201 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 NUDT22Q9BRQ3 303 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 WASH6PQ9NQA3 447 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 PRDM8Q9NQV8 689 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 PIH1D1Q9NWS0 290 aaKnown RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 DRG1Q9Y295 367 aaKnown RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 SMG1Q96Q15 3661 aaKnown RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 IGSF10Q6WRI0 2623 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 TRBV23OR9-2A0A075B6M9 112 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 TRBV5-4A0A0C4DH59 114 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 OR5K4A6NMS3 321 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 CDRT15L2A8MXV6 281 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 TMX2-CTNND1H3BSU7 103 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 CCL22O00626 93 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 SGTAO43765 313 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 CEP104O60308 925 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 SNX2O60749 519 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 ZSCAN5DPP0CG00 497 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 SLC2A4P14672 509 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 BRAFP15056 766 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 ALDH4A1P30038 563 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 RPL22P35268 128 aaKnown RBP11.01□□□□□ -0.65
SMAD4-211ENST00000590499 HADHAP40939 763 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 EIF2S3P41091 472 aaKnown RBP11.01□□□□□ -0.65
SMAD4-211ENST00000590499 GRIA1P42261 906 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 ERVPABLB-1P60509 514 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 HHEXQ03014 270 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 DMPKQ09013 629 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 EIF3IQ13347 325 aaKnown RBP11.01□□□□□ -0.65
SMAD4-211ENST00000590499 GTF2H3Q13889 308 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 POU6F1Q14863 301 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 INSCQ1MX18 579 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 LCE3BQ5TA77 95 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 AGAP9Q5VTM2 703 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 ABRAXAS1Q6UWZ7 409 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 MICALCLQ6ZW33 695 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 LINC00523Q86TU6 105 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 ZNF761Q86XN6 746 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-211ENST00000590499 TRAPPC5Q8IUR0 188 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 RASGEF1CQ8N431 466 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 PRELID2Q8N945 189 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 OR52K1Q8NGK4 314 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 MAIP1Q8WWC4 291 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 FGF11Q92914 225 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 SLC46A1Q96NT5 459 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 SEMA6CQ9H3T2 930 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 OSGEPL1Q9H4B0 414 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 ASB8Q9H765 288 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 RDH14Q9HBH5 336 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 NLE1Q9NVX2 485 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-211ENST00000590499 PAK5Q9P286 719 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 ZNF624Q9P2J8 865 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-211ENST00000590499 CPNE7Q9UBL6 633 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 DNAJC16Q9Y2G8 782 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 JRKLQ9Y4A0 524 aa11.01□□□□□ -0.65
SMAD4-211ENST00000590499 IGLV3-16A0A075B6K0 115 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 OR2AG2A6NM03 316 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 GNB5O14775 395 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 ZW10O43264 779 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 KCNJ13O60928 360 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 XRCC1P18887 633 aaPredicted RBP11□□□□□ -0.65
SMAD4-211ENST00000590499 ITGALP20701 1170 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 ACTN2P35609 894 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 GPLD1P80108 840 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 TMPRSS15P98073 1019 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 TNP2Q05952 138 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 CDH17Q12864 832 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 LONRF2Q1L5Z9 754 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 AMZ1Q400G9 498 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 MAP9Q49MG5 647 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 BCL7AQ4VC05 210 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 TBCELQ5QJ74 424 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 NKAIN2Q5VXU1 208 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 TMEM220Q6QAJ8 160 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 FAM83HQ6ZRV2 1179 aaPredicted RBP11□□□□□ -0.65
SMAD4-211ENST00000590499 USP53Q70EK8 1073 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 RAB11FIP2Q7L804 512 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 SNX20Q7Z614 316 aa11□□□□□ -0.65
SMAD4-211ENST00000590499 CLEC14AQ86T13 490 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms