RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CSNK1G3Q9Y6M4 447 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 TP53BP1Q12888 1972 aaPredicted RBP13.38□□□□□ -0.27
VMP1-210ENST00000589823 FAM95CA0A1B0GW59 222 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 LMO7DNF2Z398 122 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 LIN7AO14910 233 aaPredicted RBP13.38□□□□□ -0.27
VMP1-210ENST00000589823 SNX2O60749 519 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 NIPSNAP2O75323 286 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 FAM155BO75949 473 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 APOA4P06727 396 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 CELA2BP08218 269 aaPredicted RBP13.38□□□□□ -0.27
VMP1-210ENST00000589823 ZNF883P0CG24 379 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 ALPPL2P10696 532 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 IDSP22304 550 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 TGM1P22735 817 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 CLCNKAP51800 687 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 LIMK2P53671 638 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 SLC12A2P55011 1212 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 PLOD1Q02809 727 aaPredicted RBP13.38□□□□□ -0.27
VMP1-210ENST00000589823 DMPKQ09013 629 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 IFFO1Q0D2I5 559 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 RBM20Q5T481 1227 aaKnown RBP13.38□□□□□ -0.27
VMP1-210ENST00000589823 HECTD2Q5U5R9 776 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 OTOAQ7RTW8 1153 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 NRROSQ86YC3 692 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 CFAP206Q8IYR0 622 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 SAP25Q8TEE9 199 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 HNRNPLLQ8WVV9 542 aaKnown RBP13.38□□□□□ -0.27
VMP1-210ENST00000589823 VPS39Q96JC1 886 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 CAAP1Q9H8G2 361 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 SPATS2LQ9NUQ6 558 aaKnown RBP13.38□□□□□ -0.27
VMP1-210ENST00000589823 UCKL1Q9NWZ5 548 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 PCDHGB2Q9Y5G2 931 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 RALGAPA1Q6GYQ0 2036 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 LRP4O75096 1905 aa13.38□□□□□ -0.27
VMP1-210ENST00000589823 ADAMTS9Q9P2N4 1935 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 PDZK1P1A8MUH7 402 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 CDX4O14627 284 aaPredicted RBP13.37□□□□□ -0.27
VMP1-210ENST00000589823 PCDHGA12O60330 932 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 GFRA3O60609 400 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 SAT1P21673 171 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 AOAHP28039 575 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 CCR7P32248 378 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 SERPINB9P50453 376 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 BOP1Q14137 746 aaKnown RBP13.37□□□□□ -0.27
VMP1-210ENST00000589823 NFE2L1Q14494 772 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 DEFB133Q30KQ1 61 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 INAVAQ3KP66 663 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 TTLL9Q3SXZ7 439 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 LGSNQ5TDP6 509 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 LVRNQ6Q4G3 990 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 GATAD2AQ86YP4 633 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 CNPY4Q8N129 248 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 FAM46DQ8NEK8 389 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 LKAAEAR1Q8TD35 194 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 TMEM159Q96B96 161 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 FAM136AQ96C01 138 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 GPR22Q99680 433 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 MCMBPQ9BTE3 642 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 DPEP2Q9H4A9 486 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 COG4Q9H9E3 785 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 PPCSQ9HAB8 311 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 TAAR2Q9P1P5 351 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 KLHL42Q9P2K6 505 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 FETUBQ9UGM5 382 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 SLC24A2Q9UI40 661 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 TRMT6Q9UJA5 497 aaKnown RBP13.37□□□□□ -0.27
VMP1-210ENST00000589823 ZNF180Q9UJW8 692 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 ACSL5Q9ULC5 683 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 MTO1Q9Y2Z2 717 aaKnown RBP13.37□□□□□ -0.27
VMP1-210ENST00000589823 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 TMEM131Q92545 1883 aa13.37□□□□□ -0.27
VMP1-210ENST00000589823 TPP1O14773 563 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 YY2O15391 372 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 FFAR2O15552 330 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 KRT38O76015 456 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 SHBGP04278 402 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 ITGA2BP08514 1039 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 NUDT17P0C025 328 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 SLC2A4P14672 509 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 CD9P21926 228 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 CNTFP26441 200 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 SKIV2L2P42285 1042 aaKnown RBP13.36□□□□□ -0.27
VMP1-210ENST00000589823 HALP42357 657 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 CDKN2DP55273 166 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 POU4F1Q01851 419 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 HSPA14Q0VDF9 509 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 RPA4Q13156 261 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 SLC14A1Q13336 389 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 PDAP1Q13442 181 aaKnown RBP13.36□□□□□ -0.27
VMP1-210ENST00000589823 USP10Q14694 798 aaKnown RBP13.36□□□□□ -0.27
VMP1-210ENST00000589823 SEPT7Q16181 437 aaKnown RBP13.36□□□□□ -0.27
VMP1-210ENST00000589823 UAP1L1Q3KQV9 507 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 PLEKHS1Q5SXH7 462 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 METRNLQ641Q3 311 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 NAPRTQ6XQN6 538 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 FAM83HQ6ZRV2 1179 aaPredicted RBP13.36□□□□□ -0.27
VMP1-210ENST00000589823 KANSL1Q7Z3B3 1105 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 SLC25A45Q8N413 288 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 SIDT2Q8NBJ9 832 aaKnown RBP13.36□□□□□ -0.27
VMP1-210ENST00000589823 ASZ1Q8WWH4 475 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms