RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SPRED1Q7Z699 444 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 PRELID2Q8N945 189 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 GLIS1Q8NBF1 620 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 DDHD1Q8NEL9 900 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 OR52K1Q8NGK4 314 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 STYXQ8WUJ0 223 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 PATE1Q8WXA2 126 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 MAGOHBQ96A72 148 aaKnown RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 ULK4Q96C45 1275 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 GRAMD1AQ96CP6 724 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 DCUN1D1Q96GG9 259 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 DNAJC1Q96KC8 554 aaKnown RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 C19orf43Q9BQ61 176 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 TIMM29Q9BSF4 260 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 AP1M1Q9BXS5 423 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 NRSN2Q9GZP1 204 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 LRRN3Q9H3W5 708 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 STN1Q9H668 368 aaKnown RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 SMOXQ9NWM0 555 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 TBC1D29Q9UFV1 150 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 DNAJC16Q9Y2G8 782 aa10.21□□□□□ -0.78
SDF2-208ENST00000589788 MAP1BP46821 2468 aaKnown RBP10.21□□□□□ -0.78
SDF2-208ENST00000589788 UNC13CQ8NB66 2214 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 GOLGA6L10A0A0M3HER8 536 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 HEATR9A2RTY3 570 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 OR2AG2A6NM03 316 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 OR5K4A6NMS3 321 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 PDZK1P1A8MUH7 402 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 D6RAR5 112 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 CCL22O00626 93 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 NTN3O00634 580 aaPredicted RBP10.2□□□□□ -0.78
SDF2-208ENST00000589788 SASH3O75995 380 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 SUN1O94901 812 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 F3P13726 295 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 MC4RP32245 332 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 PAFAH1B1P43034 410 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 GPR3P46089 330 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 CLCNKAP51800 687 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 CKAP4Q07065 602 aaKnown RBP10.2□□□□□ -0.78
SDF2-208ENST00000589788 CYP4F3Q08477 520 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 SKIDA1Q1XH10 827 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 GPR33Q49SQ1 333 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 CCDC38Q502W7 563 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 IYDQ6PHW0 289 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 ZNF572Q7Z3I7 529 aaPredicted RBP10.2□□□□□ -0.78
SDF2-208ENST00000589788 SNX20Q7Z614 316 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 SLC9B2Q86UD5 537 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 C17orf82Q86X59 251 aaPredicted RBP10.2□□□□□ -0.78
SDF2-208ENST00000589788 SFRP1Q8N474 314 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 RASGEF1AQ8N9B8 481 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 AVL9Q8NBF6 648 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 MDM1Q8TC05 714 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 EPS8L3Q8TE67 593 aaKnown RBP10.2□□□□□ -0.78
SDF2-208ENST00000589788 SLC37A2Q8TED4 501 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 GTPBP3Q969Y2 492 aaKnown RBP10.2□□□□□ -0.78
SDF2-208ENST00000589788 ZNF514Q96K75 400 aaPredicted RBP10.2□□□□□ -0.78
SDF2-208ENST00000589788 CAPZA3Q96KX2 299 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 PRDM8Q9NQV8 689 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 NLE1Q9NVX2 485 aaPredicted RBP10.2□□□□□ -0.78
SDF2-208ENST00000589788 PCDHB1Q9Y5F3 818 aa10.2□□□□□ -0.78
SDF2-208ENST00000589788 AKAP13Q12802 2813 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 IGF2RP11717 2491 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 KIR2DS5A0A0G2JLQ3 304 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 A0A0G2JNG1 304 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 A0A1W2PQM1 296 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 CCDC78A2IDD5 438 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 TMX2-CTNND1H3BSU7 103 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 KIR2DS3K7RE56 304 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 AP3B1O00203 1094 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 CASC3O15234 703 aaKnown RBP10.19□□□□□ -0.78
SDF2-208ENST00000589788 PPM1DO15297 605 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 KCNJ13O60928 360 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 POP7O75817 140 aaKnown RBP10.19□□□□□ -0.78
SDF2-208ENST00000589788 EML2O95834 649 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 CD33P20138 364 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 IDSP22304 550 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 ADRA1DP25100 572 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 PBLDP30039 288 aaPredicted RBP10.19□□□□□ -0.78
SDF2-208ENST00000589788 FASLGP48023 281 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 VPS41P49754 854 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 OR1D5P58170 312 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 XIAPP98170 497 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 HHEXQ03014 270 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 KIR2DS5Q14953 304 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 TRIP13Q15645 432 aaPredicted RBP10.19□□□□□ -0.78
SDF2-208ENST00000589788 AMZ1Q400G9 498 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 MAP9Q49MG5 647 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.19□□□□□ -0.78
SDF2-208ENST00000589788 ZRANB3Q5FWF4 1079 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 FNBP1LQ5T0N5 605 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 TMEM220Q6QAJ8 160 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 DET1Q7L5Y6 550 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 TAS2R42Q7RTR8 314 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 AMZ2Q86W34 360 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 ZNF547Q8IVP9 402 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 TRIM48Q8IWZ4 208 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 NXPE1Q8N323 547 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 SH3KBP1Q96B97 665 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 ATXN7L3BQ96GX2 97 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 TMEM74Q96NL1 305 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms