RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 YY2O15391 372 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 VPS26AO75436 327 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 KRT38O76015 456 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 APOA4P06727 396 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 ACP5P13686 325 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 IDSP22304 550 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 EPHA8P29322 1005 aaPredicted RBP11.95□□□□□ -0.5
DNMT1-218ENST00000589294 CCR7P32248 378 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 CCT8P50990 548 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 CLCN7P51798 805 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 LIMK2P53671 638 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 BNIP3Q12983 259 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 RASA2Q15283 850 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 PLEKHS1Q5SXH7 462 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 HECTD2Q5U5R9 776 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 AGAP9Q5VTM2 703 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 ADGRD1Q6QNK2 874 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 WASH2PQ6VEQ5 465 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 DBX2Q6ZNG2 339 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 PRR23CQ6ZRP0 262 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 TAOK1Q7L7X3 1001 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 ASCL5Q7RTU5 278 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 OTOAQ7RTW8 1153 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 KANSL1Q7Z3B3 1105 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 TAF8Q7Z7C8 310 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 TDRPQ86YL5 185 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 IQCKQ8N0W5 287 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 ZNF548Q8NEK5 533 aaPredicted RBP11.95□□□□□ -0.5
DNMT1-218ENST00000589294 NAT14Q8WUY8 206 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 ELMO1Q92556 727 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 INPP5DQ92835 1189 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 VPS39Q96JC1 886 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 PAFAH2Q99487 392 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 GPR22Q99680 433 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 TMEM109Q9BVC6 243 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 ROPN1BQ9BZX4 212 aaPredicted RBP11.95□□□□□ -0.5
DNMT1-218ENST00000589294 ROPN1Q9HAT0 212 aaPredicted RBP11.95□□□□□ -0.5
DNMT1-218ENST00000589294 IL21RQ9HBE5 538 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 PARD6AQ9NPB6 346 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 WASH6PQ9NQA3 447 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 PCOLCE2Q9UKZ9 415 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 MTO1Q9Y2Z2 717 aaKnown RBP11.95□□□□□ -0.5
DNMT1-218ENST00000589294 DHRS7Q9Y394 339 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 PLEKHM1Q9Y4G2 1056 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 ST14Q9Y5Y6 855 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 CABIN1Q9Y6J0 2220 aa11.95□□□□□ -0.5
DNMT1-218ENST00000589294 FAM95CA0A1B0GW59 222 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 SLC5A10A0PJK1 596 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 OR5K4A6NMS3 321 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 CDX4O14627 284 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-218ENST00000589294 NIPSNAP2O75323 286 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 GPC4O75487 556 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 FAM155BO75949 473 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 KRT37O76014 449 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 SLCO2B1O94956 709 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 SHBGP04278 402 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 ANXA6P08133 673 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 ITGA2BP08514 1039 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 F7P08709 466 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-218ENST00000589294 H2AFXP16104 143 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-218ENST00000589294 ACTR1BP42025 376 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 SLC12A2P55011 1212 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 ACTR1AP61163 376 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 TIAL1Q01085 375 aaKnown RBP eCLIP11.94□□□□□ -0.5
DNMT1-218ENST00000589294 DNAJC3Q13217 504 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 C1orf61Q13536 156 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 EFTUD2Q15029 972 aaKnown RBP eCLIP11.94□□□□□ -0.5
DNMT1-218ENST00000589294 TMED2Q15363 201 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 TTLL9Q3SXZ7 439 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 OGFOD3Q6PK18 319 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 ABRAXAS1Q6UWZ7 409 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 KRT222Q8N1A0 295 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 DCLK2Q8N568 766 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 GPATCH11Q8N954 259 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 FAM46DQ8NEK8 389 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 CCL4L1Q8NHW4 92 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 DCAKDQ8WVC6 231 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 TMEM159Q96B96 161 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 MTBPQ96DY7 904 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 MRRFQ96E11 262 aaKnown RBP11.94□□□□□ -0.5
DNMT1-218ENST00000589294 TSPAN17Q96FV3 270 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 ELMO2Q96JJ3 720 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 NDNQ99608 321 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 DUSP23Q9BVJ7 150 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 DPEP2Q9H4A9 486 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 POPDC3Q9HBV1 291 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 TMEM9BQ9NQ34 198 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 UCKL1Q9NWZ5 548 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 TAAR2Q9P1P5 351 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 DOLKQ9UPQ8 538 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 KCNK6Q9Y257 313 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 MED16Q9Y2X0 877 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 PCDH15Q96QU1 1955 aa11.94□□□□□ -0.5
DNMT1-218ENST00000589294 RALGAPA1Q6GYQ0 2036 aa11.93□□□□□ -0.5
DNMT1-218ENST00000589294 EIF3FO00303 357 aaPredicted RBP11.93□□□□□ -0.5
DNMT1-218ENST00000589294 CDH16O75309 829 aa11.93□□□□□ -0.5
DNMT1-218ENST00000589294 SNRPAP09012 282 aaKnown RBP11.93□□□□□ -0.5
DNMT1-218ENST00000589294 CBSLP0DN79 551 aa11.93□□□□□ -0.5
DNMT1-218ENST00000589294 ALPPL2P10696 532 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms