RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 RHOAP61586 193 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 AP1S1P61966 158 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 PRKG2Q13237 762 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 NFYCQ13952 458 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 IKBKEQ14164 716 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 CNPY1Q3B7I2 92 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 ARMC12Q5T9G4 340 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 THEMIS2Q5TEJ8 643 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 NAIF1Q69YI7 327 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-206ENST00000589117 CWF19L1Q69YN2 538 aaKnown RBP7.31□□□□□ -1.24
ZNF540-206ENST00000589117 PTRHD1Q6GMV3 140 aaKnown RBP7.31□□□□□ -1.24
ZNF540-206ENST00000589117 CYHR1Q6ZMK1 362 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 PNPLA1Q8N8W4 532 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 ANKFN1Q8N957 763 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 HJURPQ8NCD3 748 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-206ENST00000589117 HMGCLL1Q8TB92 370 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 LRTOMTQ8WZ04 291 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 MYEOVQ96EZ4 313 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 LINGO1Q96FE5 620 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 SLC45A3Q96JT2 553 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 EXOC2Q96KP1 924 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF382Q96SR6 550 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 C9orf16Q9BUW7 83 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 NOL11Q9H8H0 719 aaKnown RBP7.31□□□□□ -1.24
ZNF540-206ENST00000589117 COQ10BQ9H8M1 238 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 IL1RL2Q9HB29 575 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 ZIM2Q9NZV7 527 aa7.31□□□□□ -1.24
ZNF540-206ENST00000589117 FAM234BA2RU67 622 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NPEPPSL1A6NEC2 478 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 CCDC160A6NGH7 325 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NCF1BA6NI72 391 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NCF1CA8MVU1 366 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 CDC7O00311 574 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 TSPAN3O60637 253 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 GJB5O95377 273 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 VNN2O95498 520 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 OTCP00480 354 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PRLP01236 227 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NCF1P14598 390 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 HDCP19113 662 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 POLR2JP52435 117 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NME5P56597 212 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 CDH18Q13634 790 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 RCAN2Q14206 197 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 GRB7Q14451 532 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 TGFBIQ15582 683 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 CRY1Q16526 586 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NRF1Q16656 503 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PDCD4Q53EL6 469 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 C6orf52Q5T4I8 152 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 FOXB2Q5VYV0 432 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PPP4R4Q6NUP7 873 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NCEH1Q6PIU2 408 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PROSER1Q86XN7 944 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 CARNMT1Q8N4J0 409 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 AADATQ8N5Z0 425 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 TRIML2Q8N7C3 387 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 FNDC5Q8NAU1 212 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 SNIP1Q8TAD8 396 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 EEF1AKMT1Q8WVE0 214 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NSUN5Q96P11 429 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PRPF18Q99633 342 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 TMEM79Q9BSE2 394 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 BRINP2Q9C0B6 783 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 SEMA6AQ9H2E6 1030 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 SARS2Q9NP81 518 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 GNPTGQ9UJJ9 305 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 LSM7Q9UK45 103 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PCTPQ9UKL6 214 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 AURKCQ9UQB9 309 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 BTRCQ9Y297 605 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 MYRFQ9Y2G1 1151 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 DHRS7Q9Y394 339 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF711Q9Y462 761 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 GPR45Q9Y5Y3 372 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 MYLKQ15746 1914 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 RNF103-CHMP3A0A140T963 221 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PPP6CO00743 305 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PRRG1O14668 218 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 SYNCRIPO60506 623 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 CSPG5O95196 566 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 F11P03951 625 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 KLKB1P03952 638 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 IRF1P10914 325 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 EDN3P14138 238 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 MSH3P20585 1137 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 DGKAP23743 735 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 RGRP47804 291 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 EPHB3P54753 998 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 EEFSECP57772 596 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 TXNL4AP83876 142 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 SFSWAPQ12872 951 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 MAD2L1Q13257 205 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 SPOUT1Q5T280 376 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 INTS11Q5TA45 600 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 LCN8Q6JVE9 175 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 METTL2BQ6P1Q9 378 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 IYDQ6PHW0 289 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 C16orf59Q7L2K0 433 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 TAS1R1Q7RTX1 841 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms