RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 HOXC4P09017 264 aaPredicted RBP11.11□□□□□ -0.63
VMP1-207ENST00000588131 HOXA6P31267 233 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 KCNC1P48547 511 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 SERPINB4P48594 390 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 KIAA1024LP59773 190 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 IL2P60568 153 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 CBX1P83916 185 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 RPL6Q02878 288 aaKnown RBP11.11□□□□□ -0.63
VMP1-207ENST00000588131 HSPA14Q0VDF9 509 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 GBX1Q14549 363 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 NFATC4Q14934 902 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 PCLAFQ15004 111 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 ACAP2Q15057 778 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 OR4D1Q15615 310 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 TSNQ15631 228 aaKnown RBP11.11□□□□□ -0.63
VMP1-207ENST00000588131 USP39Q53GS9 565 aaKnown RBP11.11□□□□□ -0.63
VMP1-207ENST00000588131 CYHR1Q6ZMK1 362 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 ABI3BPQ7Z7G0 1075 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 C11orf96Q7Z7L8 435 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 ISCA2Q86U28 154 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 CCDC63Q8NA47 563 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 CADM4Q8NFZ8 388 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 SLC39A7Q92504 469 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 SPACA7Q96KW9 195 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 LINC00615Q96LM1 132 aaPredicted RBP11.11□□□□□ -0.63
VMP1-207ENST00000588131 SLC6A18Q96N87 628 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 CCM2Q9BSQ5 444 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 MECRQ9BV79 373 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 COL25A1Q9BXS0 654 aaPredicted RBP11.11□□□□□ -0.63
VMP1-207ENST00000588131 TFB2MQ9H5Q4 396 aaKnown RBP11.11□□□□□ -0.63
VMP1-207ENST00000588131 ALG9Q9H6U8 611 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 FGF22Q9HCT0 170 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 MRPL40Q9NQ50 206 aaKnown RBP11.11□□□□□ -0.63
VMP1-207ENST00000588131 TM7SF3Q9NS93 570 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 KLHL42Q9P2K6 505 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 ADAM21Q9UKJ8 722 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 GPR34Q9UPC5 381 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 CDYLQ9Y232 598 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 SLC17A4Q9Y2C5 497 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 HS3ST3A1Q9Y663 406 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 SLC5A10A0PJK1 596 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 F8W8V4 182 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 BTN3A1O00481 513 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 GRID2O43424 1007 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 LAMTOR5O43504 91 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 GPC4O75487 556 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 BPGMP07738 259 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 DGKAP23743 735 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 ALDH3A1P30838 453 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 PREPP48147 710 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 KPNA2P52292 529 aaKnown RBP11.1□□□□□ -0.63
VMP1-207ENST00000588131 ATP6V0D1P61421 351 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 GNGT1P63211 74 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 TTLL9Q3SXZ7 439 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 PLEKHS1Q5SXH7 462 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 KLC3Q6P597 504 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 ZYG11AQ6WRX3 759 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 SLC36A4Q6YBV0 504 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 FAM83HQ6ZRV2 1179 aaPredicted RBP11.1□□□□□ -0.63
VMP1-207ENST00000588131 Q6ZSR6 202 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 LRRTM4Q86VH4 590 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 TAX1BP1Q86VP1 789 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 WDR5BQ86VZ2 330 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 SLC22A18ASQ8N1D0 253 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 OR13H1Q8NG92 308 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 DYDC1Q8WWB3 177 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 CKAP2Q8WWK9 683 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 OR1E3Q8WZA6 343 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 PDLIM5Q96HC4 596 aaKnown RBP11.1□□□□□ -0.63
VMP1-207ENST00000588131 ZNF514Q96K75 400 aaPredicted RBP11.1□□□□□ -0.63
VMP1-207ENST00000588131 MRPL57Q9BQC6 102 aaKnown RBP11.1□□□□□ -0.63
VMP1-207ENST00000588131 CAPS2Q9BXY5 557 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 FAM126AQ9BYI3 521 aaPredicted RBP11.1□□□□□ -0.63
VMP1-207ENST00000588131 PCED1AQ9H1Q7 454 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 MRPL46Q9H2W6 279 aaKnown RBP11.1□□□□□ -0.63
VMP1-207ENST00000588131 COG4Q9H9E3 785 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 COPG2Q9UBF2 871 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 SLC23A2Q9UGH3 650 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 EIF2B4Q9UI10 523 aaKnown RBP11.1□□□□□ -0.63
VMP1-207ENST00000588131 MOSPD1Q9UJG1 213 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 ADAMTS6Q9UKP5 1117 aa11.1□□□□□ -0.63
VMP1-207ENST00000588131 PNMA8BQ9ULN7 279 aaPredicted RBP11.1□□□□□ -0.63
VMP1-207ENST00000588131 LRP4O75096 1905 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 CCDC163A0A0D9SF12 145 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 NEMP2A6NFY4 417 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 A6NNZ2 444 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 MEI4A8MW99 385 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 GPR89AB7ZAQ6 455 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 SCAMP1O15126 338 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 KPNA5O15131 536 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 APOA4P06727 396 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 RBP1P09455 135 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 GPR89BP0CG08 455 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 MPC1LP0DKB6 136 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 CBSLP0DN79 551 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 CPA3P15088 417 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 BGNP21810 368 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 CD27P26842 260 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 MAOBP27338 520 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms