RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 SNX20Q7Z614 316 aa15.77■□□□□ 0.12
CXXC1-209ENST00000587342 PIANPQ8IYJ0 282 aa15.77■□□□□ 0.12
CXXC1-209ENST00000587342 NKD1Q969G9 470 aa15.77■□□□□ 0.12
CXXC1-209ENST00000587342 C9orf72Q96LT7 481 aa15.77■□□□□ 0.12
CXXC1-209ENST00000587342 RMDN2Q96LZ7 410 aa15.77■□□□□ 0.12
CXXC1-209ENST00000587342 TGM7Q96PF1 710 aa15.77■□□□□ 0.12
CXXC1-209ENST00000587342 INSM2Q96T92 566 aaPredicted RBP15.77■□□□□ 0.12
CXXC1-209ENST00000587342 WWP1Q9H0M0 922 aa15.77■□□□□ 0.12
CXXC1-209ENST00000587342 LZTFL1Q9NQ48 299 aa15.77■□□□□ 0.12
CXXC1-209ENST00000587342 FEZ2Q9UHY8 353 aaPredicted RBP15.77■□□□□ 0.12
CXXC1-209ENST00000587342 CRLS1Q9UJA2 301 aa15.77■□□□□ 0.12
CXXC1-209ENST00000587342 PCDHGA4Q9Y5G9 962 aa15.77■□□□□ 0.12
CXXC1-209ENST00000587342 DNMT3AQ9Y6K1 912 aaPredicted RBP15.77■□□□□ 0.12
CXXC1-209ENST00000587342 MGAT4DA6NG13 374 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 GOLGA6L6A8MZA4 724 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 STMND1H3BQB6 276 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 CAPN5O15484 640 aaPredicted RBP15.76■□□□□ 0.11
CXXC1-209ENST00000587342 KRT86O43790 486 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 KCNJ13O60928 360 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 MTHFD1P11586 935 aaKnown RBP15.76■□□□□ 0.11
CXXC1-209ENST00000587342 ITGALP20701 1170 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 PSMA3P25788 255 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 PRLHRP49683 370 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 SH3BP2P78314 561 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 RHDQ02161 417 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 SNX1Q13596 522 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 CCDC38Q502W7 563 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 TMEM164Q5U3C3 297 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 PLXDC1Q8IUK5 500 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 OR52K1Q8NGK4 314 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 OR2L2Q8NH16 312 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 LINC00615Q96LM1 132 aaPredicted RBP15.76■□□□□ 0.11
CXXC1-209ENST00000587342 C19orf43Q9BQ61 176 aa15.76■□□□□ 0.11
CXXC1-209ENST00000587342 IMP3Q9NV31 184 aaKnown RBP15.76■□□□□ 0.11
CXXC1-209ENST00000587342 NLE1Q9NVX2 485 aaPredicted RBP15.76■□□□□ 0.11
CXXC1-209ENST00000587342 HELZ2Q9BYK8 2649 aaKnown RBP15.76■□□□□ 0.11
CXXC1-209ENST00000587342 MROH6A6NGR9 719 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 OR51F1A6NGY5 319 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 H7C0S8 307 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 ACRV1P26436 265 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 HALP42357 657 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 RAB15P59190 212 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 CYP4F2P78329 520 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 PDE1BQ01064 536 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 LY6DQ14210 128 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 DBN1Q16643 649 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 MANEAQ5SRI9 462 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 DCAF12Q5T6F0 453 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 ZNF662Q6ZS27 426 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 FAM92BQ6ZTR7 304 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 TIPARPQ7Z3E1 657 aaKnown RBP15.75■□□□□ 0.11
CXXC1-209ENST00000587342 PRSS42Q7Z5A4 293 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 SERPINA9Q86WD7 417 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 LRRC8AQ8IWT6 810 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 CCDC112Q8NEF3 446 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 ULK4Q96C45 1275 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 ZNF514Q96K75 400 aaPredicted RBP15.75■□□□□ 0.11
CXXC1-209ENST00000587342 COPS8Q99627 209 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 NRTNQ99748 197 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 TLR10Q9BXR5 811 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 ETNK1Q9HBU6 452 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 PILRAQ9UKJ1 303 aa15.75■□□□□ 0.11
CXXC1-209ENST00000587342 TK2O00142 265 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 RAD1O60671 282 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 SUN1O94901 812 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 IFNB1P01574 187 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 ZSCAN5DPP0CG00 497 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 LIFP15018 202 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 ZNF28P17035 718 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 AMD1P17707 334 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 HADHAP40939 763 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 SEPHS1P49903 392 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 RPS6KA1Q15418 735 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 ZRANB3Q5FWF4 1079 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 RBM12BQ8IXT5 1001 aaKnown RBP15.74■□□□□ 0.11
CXXC1-209ENST00000587342 ZNF843Q8N446 348 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 CLDN19Q8N6F1 224 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 LSM14AQ8ND56 463 aaKnown RBP15.74■□□□□ 0.11
CXXC1-209ENST00000587342 OR13J1Q8NGT2 312 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 CDKN2AIPNLQ96HQ2 116 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 ASPSCR1Q9BZE9 553 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 ZNF768Q9H5H4 540 aaKnown RBP15.74■□□□□ 0.11
CXXC1-209ENST00000587342 FBXO8Q9NRD0 319 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 ZDHHC3Q9NYG2 299 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 SLC2A6Q9UGQ3 507 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 PRSS21Q9Y6M0 314 aa15.74■□□□□ 0.11
CXXC1-209ENST00000587342 CCDC162PA2VCL2 907 aa15.73■□□□□ 0.11
CXXC1-209ENST00000587342 DLGAP3O95886 979 aa15.73■□□□□ 0.11
CXXC1-209ENST00000587342 POLBP06746 335 aa15.73■□□□□ 0.11
CXXC1-209ENST00000587342 CCDC175P0C221 793 aa15.73■□□□□ 0.11
CXXC1-209ENST00000587342 ATP1B2P14415 290 aaPredicted RBP15.73■□□□□ 0.11
CXXC1-209ENST00000587342 FOXN2P32314 431 aa15.73■□□□□ 0.11
CXXC1-209ENST00000587342 SEMA5AQ13591 1074 aa15.73■□□□□ 0.11
CXXC1-209ENST00000587342 LINC00303Q3SY05 128 aa15.73■□□□□ 0.11
CXXC1-209ENST00000587342 GPR33Q49SQ1 333 aa15.73■□□□□ 0.11
CXXC1-209ENST00000587342 TAF1BQ53T94 588 aaPredicted RBP15.73■□□□□ 0.11
CXXC1-209ENST00000587342 CAPRIN2Q6IMN6 1127 aaKnown RBP15.73■□□□□ 0.11
CXXC1-209ENST00000587342 IRGCQ6NXR0 463 aa15.73■□□□□ 0.11
CXXC1-209ENST00000587342 CERS6Q6ZMG9 384 aa15.73■□□□□ 0.11
CXXC1-209ENST00000587342 HM13Q8TCT9 377 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms