RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 LCP2Q13094 533 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 STARD3Q14849 445 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 TMEM196Q5HYL7 178 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 AGBL4Q5VU57 503 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 METTL21CQ5VZV1 264 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 ZNF776Q68DI1 518 aaPredicted RBP19.52■□□□□ 0.72
TRIM47-204ENST00000587339 ACAD11Q709F0 780 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 PELI3Q8N2H9 469 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 HDDC3Q8N4P3 179 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 IL17RCQ8NAC3 791 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 OR2T3Q8NH03 318 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 KCNV2Q8TDN2 545 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 TRPC4APQ8TEL6 797 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 OR52B2Q96RD2 323 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 MID1IP1Q9NPA3 183 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 ARL8BQ9NVJ2 186 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 CDYLQ9Y232 598 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 CAPN14A8MX76 684 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 E9PBE3 544 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 PPP6CO00743 305 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 MBTPS2O43462 519 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 TSPAN6O43657 245 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 KLHL41O60662 606 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 CDK14O94921 469 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 NCF2P19878 526 aaPredicted RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 SMAD4Q13485 552 aaKnown RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 UBAP2LQ14157 1087 aaKnown RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 TBCCQ15814 346 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 PLEKHS1Q5SXH7 462 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 KIAA1211LQ6NV74 962 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 PLCD3Q8N3E9 789 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 BEND7Q8N7W2 519 aaPredicted RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 RASGEF1AQ8N9B8 481 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 STON2Q8WXE9 905 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 ELMO1Q92556 727 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 ESAMQ96AP7 390 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 NSL1Q96IY1 281 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 GABRG3Q99928 467 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 CCDC106Q9BWC9 280 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 C8orf33Q9H7E9 229 aaPredicted RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 SEMA4BQ9NPR2 832 aaPredicted RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 PCTPQ9UKL6 214 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 COLQQ9Y215 455 aaPredicted RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 AP1G1O43747 822 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 HNRNPCL1O60812 293 aaKnown RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 SKAP2O75563 359 aaPredicted RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 GUCA1CO95843 209 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 DRD1P21728 446 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 COPAP53621 1224 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 GRSF1Q12849 480 aaKnown RBP eCLIP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 GBX1Q14549 363 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 PHKG1Q16816 387 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 NLRP8Q86W28 1048 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 PDPRQ8NCN5 879 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 SKA2Q8WVK7 121 aaPredicted RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 ASZ1Q8WWH4 475 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 DNASE1L2Q92874 299 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 UBE2ZQ9H832 354 aaPredicted RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 CNOT6Q9ULM6 557 aaKnown RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 TRIM33Q9UPN9 1127 aa19.51■□□□□ 0.71
TRIM47-204ENST00000587339 TNPO3Q9Y5L0 923 aaKnown RBP19.51■□□□□ 0.71
TRIM47-204ENST00000587339 CKAP5Q14008 2032 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 A0A1W2PP55 124 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 NUAK1O60285 661 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 ATG13O75143 517 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 RNASEH2AO75792 299 aaKnown RBP19.5■□□□□ 0.71
TRIM47-204ENST00000587339 PCDH8O95206 1070 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 MLYCDO95822 493 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 VCLP18206 1134 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 CALB2P22676 271 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 CTSCP53634 463 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 TAS2R38P59533 333 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 RPS14P62263 151 aaKnown RBP19.5■□□□□ 0.71
TRIM47-204ENST00000587339 CCDC85BQ15834 202 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-204ENST00000587339 LSM12Q3MHD2 195 aaKnown RBP19.5■□□□□ 0.71
TRIM47-204ENST00000587339 CLEC6AQ6EIG7 209 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 ASRGL1Q7L266 308 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 CLYBLQ8N0X4 340 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 ZNF483Q8TF39 744 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-204ENST00000587339 DLG3Q92796 817 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 EGFL8Q99944 293 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 ZCCHC2Q9C0B9 1178 aaKnown RBP19.5■□□□□ 0.71
TRIM47-204ENST00000587339 MKRN2Q9H000 416 aaKnown RBP19.5■□□□□ 0.71
TRIM47-204ENST00000587339 SERGEFQ9UGK8 458 aa19.5■□□□□ 0.71
TRIM47-204ENST00000587339 PRR5-ARHGAP8B1AHC4 643 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 E2F3O00716 465 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 TM7SF2O76062 418 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 FGF4P08620 206 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 ESRRAP11474 423 aaPredicted RBP19.49■□□□□ 0.71
TRIM47-204ENST00000587339 HOXB2P14652 356 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 PRLHRP49683 370 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 ARHGAP8P85298 464 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 BTKQ06187 659 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 SKIV2LQ15477 1246 aaKnown RBP19.49■□□□□ 0.71
TRIM47-204ENST00000587339 TREML1Q86YW5 311 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 PTCD3Q96EY7 689 aaKnown RBP19.49■□□□□ 0.71
TRIM47-204ENST00000587339 MAELQ96JY0 434 aaKnown RBP19.49■□□□□ 0.71
TRIM47-204ENST00000587339 HGH1Q9BTY7 390 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 RDH14Q9HBH5 336 aa19.49■□□□□ 0.71
TRIM47-204ENST00000587339 ZBTB26Q9HCK0 441 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms