RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 SPEM1Q8N4L4 309 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 PPP1R35Q8TAP8 253 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 UBA3Q8TBC4 463 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 ASB12Q8WXK4 309 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 RUBCNQ92622 972 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 CLDN23Q96B33 292 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 FAM149B1Q96BN6 582 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 MVB12AQ96EY5 273 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 C7orf26Q96N11 449 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 LRRC3BQ96PB8 259 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 MED15Q96RN5 788 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 PNKPQ96T60 521 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 CRACR2AQ9BSW2 395 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 BBS2Q9BXC9 721 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 ULBP1Q9BZM6 244 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 UBXN6Q9BZV1 441 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 MIS12Q9H081 205 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 BTBD1Q9H0C5 482 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 XAB2Q9HCS7 855 aaKnown RBP4.76□□□□□ -1.65
ZNF540-204ENST00000586792 CNGB3Q9NQW8 809 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 SPTLC3Q9NUV7 552 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.76□□□□□ -1.65
ZNF540-204ENST00000586792 IL37Q9NZH6 218 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 H2AFY2Q9P0M6 372 aaPredicted RBP4.76□□□□□ -1.65
ZNF540-204ENST00000586792 DEC1Q9P2X7 70 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 DKK3Q9UBP4 350 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 PCSK1NQ9UHG2 260 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 C19orf53Q9UNZ5 99 aaPredicted RBP4.76□□□□□ -1.65
ZNF540-204ENST00000586792 CORO2BQ9UQ03 480 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 NFE2L3Q9Y4A8 694 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 PCDHGB2Q9Y5G2 931 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 R4GN57 208 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 ANAPC1Q9H1A4 1944 aa4.76□□□□□ -1.65
ZNF540-204ENST00000586792 C17orf113A0A1B0GUU1 675 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 TBC1D3BA6NDS4 549 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 HHLA1C9JL84 531 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 NEDD8-MDP1E9PL57 170 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 TRDMT1O14717 391 aaKnown RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 MDM4O15151 490 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 TSPAN3O60637 253 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 UBXN7O94888 489 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 IPO7O95373 1038 aaKnown RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 TGDSO95455 350 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 EGFP01133 1207 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 APOEP02649 317 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 SLC4A1P02730 911 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 ZDHHC11BP0C7U3 371 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 CHRNB1P11230 501 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 ALOX15P16050 662 aaPredicted RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 PON1P27169 355 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 CERS1P27544 350 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 CORO1AP31146 461 aaKnown RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 EIF2DP41214 584 aaKnown RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 SLC11A2P49281 568 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 SP140Q13342 867 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 LAMB3Q13751 1172 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 RASA2Q15283 850 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 ARL13BQ3SXY8 428 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 FILIP1LQ4L180 1135 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 RAB41Q5JT25 222 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 EOGTQ5NDL2 527 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 C10orf76Q5T2E6 689 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 CAVIN1Q6NZI2 390 aaKnown RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 VWA1Q6PCB0 445 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 TSSK4Q6SA08 328 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 CRTC1Q6UUV9 634 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 Q6ZS52 159 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 TPGS1Q6ZTW0 290 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 FAM47EQ6ZV65 393 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 CACNA2D4Q7Z3S7 1137 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 LONP2Q86WA8 852 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 ZNF557Q8N988 423 aaPredicted RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 AVL9Q8NBF6 648 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 TSTD1Q8NFU3 115 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 LILRB1Q8NHL6 650 aaPredicted RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 RPLP0P6Q8NHW5 317 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 GPT2Q8TD30 523 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 ADAMTS15Q8TE58 950 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 DDI1Q8WTU0 396 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 CHTF18Q8WVB6 975 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 RFFLQ8WZ73 363 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 IRGQQ8WZA9 623 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 KAT5Q92993 513 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 FBXL20Q96IG2 436 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 ZNF845Q96IR2 970 aaPredicted RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 ZC3H10Q96K80 434 aaKnown RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 HSFY1Q96LI6 401 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 SERPINB11Q96P15 392 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 DDX50Q9BQ39 737 aaKnown RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 GPATCH1Q9BRR8 931 aaKnown RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 DESI2Q9BSY9 194 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 MAGEH1Q9H213 219 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 VPS16Q9H269 839 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 LINC00597Q9H2U6 94 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 NMUR1Q9HB89 426 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 PRMT8Q9NR22 394 aaPredicted RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 SPHK2Q9NRA0 654 aa4.75□□□□□ -1.65
ZNF540-204ENST00000586792 SAMSN1Q9NSI8 373 aaKnown RBP4.75□□□□□ -1.65
ZNF540-204ENST00000586792 RBM12Q9NTZ6 932 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms