RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 GPSM1Q86YR5 675 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 C10orf107Q8IVU9 208 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 SFTPA1Q8IWL2 248 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 PLD6Q8N2A8 252 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 AADATQ8N5Z0 425 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 CLDN19Q8N6F1 224 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 DENND6BQ8NEG7 585 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 PIWIL2Q8TC59 973 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 MAGEC3Q8TD91 643 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 CCT6BQ92526 530 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 GLMNQ92990 594 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 SCAMP4Q969E2 229 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 KIAA1191Q96A73 305 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 EID2BQ96D98 161 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 SGF29Q96ES7 293 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 FAR2Q96K12 515 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 CNDP1Q96KN2 507 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 RILPQ96NA2 401 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 BIRC8Q96P09 236 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 ZNF317Q96PQ6 595 aaPredicted RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 CCM2Q9BSQ5 444 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 IER2Q9BTL4 223 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 BOCQ9BWV1 1114 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 C1QTNF1Q9BXJ1 281 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 UNKQ9C0B0 810 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 ILKAPQ9H0C8 392 aaPredicted RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 C12orf65Q9H3J6 166 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 EPHX3Q9H6B9 360 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 PRM3Q9NNZ6 103 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 IGSF5Q9NSI5 407 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 OXSMQ9NWU1 459 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 WWOXQ9NZC7 414 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 WNT16Q9UBV4 365 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 VTI1BQ9UEU0 232 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 EMCNQ9ULC0 261 aa6.1□□□□□ -1.43
LIG3-206ENST00000586058 APOBEC2Q9Y235 224 aaKnown RBP6.1□□□□□ -1.43
LIG3-206ENST00000586058 ATXN2Q99700 1313 aaKnown RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 IGLV3-16A0A075B6K0 115 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 A0A1W2PQU0 124 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 KANSL1LA0AUZ9 987 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 IGLON5A6NGN9 336 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 NCF1BA6NI72 391 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 A8MT66 165 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 NCF1CA8MVU1 366 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 FADS2P1A8MWK0 482 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 CHURC1-FNTBB4DL54 471 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 G3V2L1 256 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 H3BM21 787 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 STX16-NPEPL1H3BU86 382 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 PLK4O00444 970 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 IFRD1O00458 451 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 TOR1BO14657 336 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 STX16O14662 325 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 HGSO14964 777 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 SLC16A5O15375 505 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 SNX3O60493 162 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 NDUFS2O75306 463 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 KATNA1O75449 491 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 MLYCDO95822 493 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 KITP10721 976 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 FGF3P11487 239 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 MYCLP1P12525 358 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 NCF1P14598 390 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 NDUFV2P19404 249 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 TEAD1P28347 426 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 AKT2P31751 481 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 DRD3P35462 400 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 MAGEA9P43362 315 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 CSRP3P50461 194 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 CLCN7P51798 805 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 THOP1P52888 689 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 METAP1P53582 386 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 ALDH18A1P54886 795 aaKnown RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 AP1S2P56377 157 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 DNAJB13P59910 316 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 HERVK_113P63132 956 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 TMEM115Q12893 351 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 CCINQ13939 588 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 AGERQ15109 404 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 IRF4Q15306 451 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 TSNQ15631 228 aaKnown RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 RBBP7Q16576 425 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 PFKFB4Q16877 469 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 BCL7AQ4VC05 210 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 SEL1L3Q68CR1 1132 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 ANKS6Q68DC2 871 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 KIAA1211LQ6NV74 962 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 DOK6Q6PKX4 331 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 ADAMTSL4Q6UY14 1074 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 UBE2R2Q712K3 238 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 SYT13Q7L8C5 426 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 TRIM69Q86WT6 500 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 HEATR4Q86WZ0 1026 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 SIX5Q8N196 739 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 SPATA6LQ8N4H0 392 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 PTGR2Q8N8N7 351 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 ACVR1CQ8NER5 493 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 FLCNQ8NFG4 579 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 OR2T34Q8NGX1 318 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 FAM174AQ8TBP5 190 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms