RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 IFRD1O00458 451 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-215ENST00000584944 KPNA5O15131 536 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 OR1I1O60431 355 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 FUCA1P04066 466 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 APOA4P06727 396 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 CELA2BP08218 269 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-215ENST00000584944 FMO4P31512 558 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 ARCN1P48444 511 aaKnown RBP13.63□□□□□ -0.23
TRAF4-215ENST00000584944 PRLHRP49683 370 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 CTSCP53634 463 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 CTBP1Q13363 440 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 BOP1Q14137 746 aaKnown RBP13.63□□□□□ -0.23
TRAF4-215ENST00000584944 TRIP6Q15654 476 aaKnown RBP13.63□□□□□ -0.23
TRAF4-215ENST00000584944 C6orf132Q5T0Z8 1188 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 KCTD16Q68DU8 428 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 KIAA0408Q6ZU52 694 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 CTAGE3PQ8IX95 158 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 CFAP206Q8IYR0 622 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 ARL10Q8N8L6 244 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 CCL4L1Q8NHW4 92 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 SKA2Q8WVK7 121 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-215ENST00000584944 ELMO1Q92556 727 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 TMEM159Q96B96 161 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 C9orf72Q96LT7 481 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 SARS2Q9NP81 518 aaKnown RBP13.63□□□□□ -0.23
TRAF4-215ENST00000584944 ZDHHC18Q9NUE0 388 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 FBXO5Q9UKT4 447 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 ACSL5Q9ULC5 683 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 FREM2Q5SZK8 3169 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 DSPP15924 2871 aaKnown RBP13.62□□□□□ -0.23
TRAF4-215ENST00000584944 SCN8AQ9UQD0 1980 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 LAMA5O15230 3695 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 CPED1A4D0V7 1026 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 OR5K4A6NMS3 321 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 RHPN2P1A8MT19 583 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 TRIM38O00635 465 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 TP73O15350 636 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 TNFSF14O43557 240 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 ESR1P03372 595 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 CAPNS1P04632 268 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 ITGB6P18564 788 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 CHRM3P20309 590 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 ARNTP27540 789 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 SLC1A2P43004 574 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 PLOD1Q02809 727 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-215ENST00000584944 ILF2Q12905 390 aaKnown RBP13.62□□□□□ -0.23
TRAF4-215ENST00000584944 STEAP4Q687X5 459 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 OTOAQ7RTW8 1153 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 AGGF1Q8N302 714 aaeCLIP13.62□□□□□ -0.23
TRAF4-215ENST00000584944 LRRN4CLQ8ND94 238 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 OR6C4Q8NGE1 309 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 OR2L2Q8NH16 312 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 HM13Q8TCT9 377 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 MAPK15Q8TD08 544 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 NAT14Q8WUY8 206 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 NAT6Q93015 286 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 CXorf40BQ96DE9 158 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 APOLD1Q96LR9 279 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 ABCG4Q9H172 646 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 FBXO6Q9NRD1 293 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-215ENST00000584944 PCOLCE2Q9UKZ9 415 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 BTBD3Q9Y2F9 522 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 PLEKHM1Q9Y4G2 1056 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 IKBKGQ9Y6K9 419 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 ANKRD11Q6UB99 2663 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-215ENST00000584944 ATRXP46100 2492 aa13.62□□□□□ -0.23
TRAF4-215ENST00000584944 MYLKQ15746 1914 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 LIN7AO14910 233 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-215ENST00000584944 CBFA2T3O75081 653 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 F3P13726 295 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 CKMT2P17540 419 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 RPL10P27635 214 aaKnown RBP13.61□□□□□ -0.23
TRAF4-215ENST00000584944 SSTR1P30872 391 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 CA5AP35218 305 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 SLC12A2P55011 1212 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 B4GALNT1Q00973 533 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 FRG1Q14331 258 aaKnown RBP13.61□□□□□ -0.23
TRAF4-215ENST00000584944 SEMA3AQ14563 771 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 BRD3Q15059 726 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 TYSND1Q2T9J0 566 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 SLC9B2Q86UD5 537 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 ZNF547Q8IVP9 402 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 DENND6AQ8IWF6 608 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 UNC5BQ8IZJ1 945 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 ASZ1Q8WWH4 475 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 ADAMTS14Q8WXS8 1223 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 SYNDIG1Q9H7V2 258 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 SPATS2LQ9NUQ6 558 aaKnown RBP13.61□□□□□ -0.23
TRAF4-215ENST00000584944 PADI4Q9UM07 663 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 PSMD13Q9UNM6 376 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 APOBEC2Q9Y235 224 aaKnown RBP13.61□□□□□ -0.23
TRAF4-215ENST00000584944 COMMD10Q9Y6G5 202 aa13.61□□□□□ -0.23
TRAF4-215ENST00000584944 PLXNB3Q9ULL4 1909 aa13.6□□□□□ -0.23
TRAF4-215ENST00000584944 TRBV23OR9-2A0A075B6M9 112 aa13.6□□□□□ -0.23
TRAF4-215ENST00000584944 KIR2DS5A0A0G2JLQ3 304 aa13.6□□□□□ -0.23
TRAF4-215ENST00000584944 A0A0G2JNG1 304 aa13.6□□□□□ -0.23
TRAF4-215ENST00000584944 C17orf113A0A1B0GUU1 675 aa13.6□□□□□ -0.23
TRAF4-215ENST00000584944 KIR2DS3K7RE56 304 aa13.6□□□□□ -0.23
TRAF4-215ENST00000584944 TAF4O00268 1085 aa13.6□□□□□ -0.23
TRAF4-215ENST00000584944 VPS26AO75436 327 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms