RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TMC8Q8IU68 726 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 DCAF4L2Q8NA75 395 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 KDM1BQ8NB78 822 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 CEP70Q8NHQ1 597 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 HIST1H2AHQ96KK5 128 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 GPR78Q96P69 363 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 HIST1H2AJQ99878 128 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 H2AFJQ9BTM1 129 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 MRPL1Q9BYD6 325 aaKnown RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 ZNF487B1APH4 448 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 MATN2O00339 956 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 SNNO75324 88 aaPredicted RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 ATP6V1B1P15313 513 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 NFKBIAP25963 317 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 LEPRP48357 1165 aaKnown RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 RPIAP49247 311 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 KPNA2P52292 529 aaKnown RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 LAPTM4AQ15012 233 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 CARD16Q5EG05 197 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 SYVN1Q86TM6 617 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 CRIPAKQ8N1N5 446 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 OR2A12Q8NGT7 310 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 UCMAQ8WVF2 138 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 PIH1D2Q8WWB5 315 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 CMTM5Q96DZ9 223 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 PLEKHG4BQ96PX9 1271 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 DRC3Q9H069 523 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 MRPL40Q9NQ50 206 aaKnown RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 KCNK6Q9Y257 313 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 U3KQV3 271 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 CFAP73A6NFT4 308 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 CYP27C1Q4G0S4 372 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 OTUD3Q5T2D3 398 aaPredicted RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 IYDQ6PHW0 289 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 PARM1Q6UWI2 310 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 LMNTD2Q8IXW0 634 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 AFAP1L2Q8N4X5 818 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 KRTCAP2Q8N6L1 136 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 RLN3Q8WXF3 142 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 APOLD1Q96LR9 279 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 ALG2Q9H553 416 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D30Q9Y2I9 924 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 SCN2AQ99250 2005 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 PDCD11Q14690 1871 aaKnown RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 MIA3Q5JRA6 1907 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 hCG_2014768A0A024R1R8 64 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D3DA0A087WVF3 549 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D3IA0A087WXS9 549 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D3EA0A087X179 549 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D3KA0A087X1G2 549 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 FAM92AA1XBS5 289 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D3FA6NER0 549 aaPredicted RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 LOC730098B7Z3J9 87 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D3LB9A6J9 549 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 E7ENX8 843 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 SDHDO14521 159 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 BIRC5O15392 142 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 CHEK2O96017 543 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D3HP0C7X1 549 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 ITGAXP20702 1163 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 ZNF140P52738 457 aaPredicted RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 MAPK10P53779 464 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 SMARCB1Q12824 385 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 LACTB2Q53H82 288 aaPredicted RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D3GQ6DHY5 549 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D3CQ6IPX1 549 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 YTHDF3Q7Z739 585 aaKnown RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 TBC1D3Q8IZP1 549 aaPredicted RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 SYTL2Q9HCH5 934 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 NSMCE4AQ9NXX6 385 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.13□□□□□ -0.79
RFFL-212ENST00000584655 MCM8Q9UJA3 840 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 NINQ8N4C6 2090 aa10.13□□□□□ -0.79
RFFL-212ENST00000584655 C16orf96A6NNT2 1141 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 CYP17A1P05093 508 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 ATP5BP06576 529 aaKnown RBP10.12□□□□□ -0.79
RFFL-212ENST00000584655 TSHRP16473 764 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 PTNP21246 168 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 FSHRP23945 695 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 MAP4P27816 1152 aaKnown RBP10.12□□□□□ -0.79
RFFL-212ENST00000584655 RNF144AP50876 292 aaPredicted RBP10.12□□□□□ -0.79
RFFL-212ENST00000584655 NFYCQ13952 458 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 LETMD1Q6P1Q0 360 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 PRR23CQ6ZRP0 262 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 TMPRSS6Q8IU80 811 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 KYQ8NBH2 561 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 OR4F6Q8NGB9 312 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 CD200R1Q8TD46 325 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 FGF14Q92915 247 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 EGLN2Q96KS0 407 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 BIRC8Q96P09 236 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 HERC2P3Q9BVR0 1158 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 LRMDAQ9H2I8 198 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 SOX17Q9H6I2 414 aaPredicted RBP10.12□□□□□ -0.79
RFFL-212ENST00000584655 EML4Q9HC35 981 aaKnown RBP10.12□□□□□ -0.79
RFFL-212ENST00000584655 IMP3Q9NV31 184 aaKnown RBP10.12□□□□□ -0.79
RFFL-212ENST00000584655 NLE1Q9NVX2 485 aaPredicted RBP10.12□□□□□ -0.79
RFFL-212ENST00000584655 NDE1Q9NXR1 346 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms