RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 PPARGP37231 505 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 RPIAP49247 311 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 DUSP3P51452 185 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 DAB2P98082 770 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 ILF3Q12906 894 aaKnown RBP eCLIP15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 LRP8Q14114 963 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 KBTBD12Q3ZCT8 623 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 KHDC1Q4VXA5 237 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 PYCR3Q53H96 274 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 ZNF648Q5T619 568 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 KIAA0408Q6ZU52 694 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 TMPRSS12Q86WS5 348 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 PROSER1Q86XN7 944 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 GALNT13Q8IUC8 556 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 CACTIN-AS1Q8N1I8 211 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 C2CD4AQ8NCU7 369 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 GDAP1Q8TB36 358 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 HEXDCQ8WVB3 486 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 HNRNPLLQ8WVV9 542 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 OR2M4Q96R27 311 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 COPS8Q99627 209 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 GSDMCQ9BYG8 508 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 ACSS3Q9H6R3 686 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 INTS10Q9NVR2 710 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 FBXO5Q9UKT4 447 aa15.74■□□□□ 0.11
CSNK1D-223ENST00000584472 DSPP15924 2871 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 UQCRHLA0A096LP55 91 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 LY6G6EA0A0G2JKS1 128 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 VEGFDO43915 354 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 MTX2O75431 263 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 RFPL3O75679 317 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 ASMTLO95671 621 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 S1PR4O95977 384 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 UQCRHP07919 91 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 MPP1Q00013 466 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 B4GALNT1Q00973 533 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 TMEM115Q12893 351 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 DNAJC3Q13217 504 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 EFTUD2Q15029 972 aaKnown RBP eCLIP15.73■□□□□ 0.111e-6■■□□□ 11.5
CSNK1D-223ENST00000584472 RNF187Q5TA31 235 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 PACS1Q6VY07 963 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 MARK2Q7KZI7 788 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 TAF8Q7Z7C8 310 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 GALNT7Q86SF2 657 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 ADGRG6Q86SQ4 1221 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 SLC26A11Q86WA9 606 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 UHMK1Q8TAS1 419 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 CCDC97Q96F63 343 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 CYTH2Q99418 400 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 ZCCHC2Q9C0B9 1178 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 FBXO6Q9NRD1 293 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 NSMCE4AQ9NXX6 385 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 ATXN10Q9UBB4 475 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 GPR34Q9UPC5 381 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 U3KQA8 63 aa15.73■□□□□ 0.11
CSNK1D-223ENST00000584472 SRRM3A6NNA2 597 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 PFDN6O15212 129 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 NUAK1O60285 661 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 OR1I1O60431 355 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 DNAJC6O75061 913 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 NDUFS3O75489 264 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 GP1BAP07359 652 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 F7P08709 466 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 ZNF7P17097 686 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 MSH3P20585 1137 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 AKT1P31749 480 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 NSG1P42857 185 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 LEPRP48357 1165 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 NAB1Q13506 487 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 NR0B2Q15466 257 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 TCEA2Q15560 299 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 KLHL38Q2WGJ6 581 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 ZNF789Q5FWF6 425 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 BEND6Q5SZJ8 279 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 NRROSQ86YC3 692 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 CTAGE3PQ8IX95 158 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 SLC35F3Q8IY50 421 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 PPM1NQ8N819 430 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 ARL10Q8N8L6 244 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 FAM46DQ8NEK8 389 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 LPGAT1Q92604 370 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 NAT6Q93015 286 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 DCUN1D1Q96GG9 259 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 OR2AG1Q9H205 316 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 ZNHIT2Q9UHR6 403 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 PSAT1Q9Y617 370 aa15.72■□□□□ 0.11
CSNK1D-223ENST00000584472 ZFC3H1O60293 1989 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 ARHGEF17Q96PE2 2063 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 CFAP99D6REC4 459 aa15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 CHUKO15111 745 aa15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 CDK14O94921 469 aa15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 HAUS5O94927 633 aa15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 AHSGP02765 367 aa15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 RALBP11234 206 aa15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 ATP1B2P14415 290 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 H2AFXP16104 143 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 ZNF8P17098 575 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 GABRB3P28472 473 aa15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 ADARP55265 1226 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-223ENST00000584472 CTBSQ01459 385 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms