RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 CFHR5Q9BXR6 569 aa11.48□□□□□ -0.57
CDK5RAP3-231ENST00000584063 NUSAP1Q9BXS6 441 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-231ENST00000584063 KCTD3Q9Y597 815 aa11.48□□□□□ -0.57
CDK5RAP3-231ENST00000584063 PCDHGA8Q9Y5G5 932 aa11.48□□□□□ -0.57
CDK5RAP3-231ENST00000584063 MYLKQ15746 1914 aa11.48□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SMIM31A0A1B0GVY4 71 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SUPT7LO94864 414 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TBX18O95935 607 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ZNF26P17031 533 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 YAP1P46937 504 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SULT2A1Q06520 285 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SCAPQ12770 1279 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 GALEQ14376 348 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 MAPRE2Q15555 327 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 VARS2Q5ST30 1063 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ARTNQ5T4W7 220 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 METTL2BQ6P1Q9 378 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SCIMPQ6UWF3 145 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.47□□□□□ -0.571e-10■■■■■ 46
CDK5RAP3-231ENST00000584063 OFCC1Q8IZS5 231 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 DCBLD1Q8N8Z6 715 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 STYXQ8WUJ0 223 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SLCO4A1Q96BD0 722 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SUSD3Q96L08 255 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 C3orf30Q96M34 536 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 DEPDC7Q96QD5 511 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 KCNA7Q96RP8 456 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 FAM96AQ9H5X1 160 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ALG9Q9H6U8 611 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 GORASP2Q9H8Y8 452 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 CRNNQ9UBG3 495 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 MED16Q9Y2X0 877 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 PRSS51A0A1B0GVH4 220 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 OR6C74A6NCV1 312 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SOCS2O14508 198 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 BCAS2O75934 225 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SIX3O95343 332 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 HNF4AP41235 474 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SLC5A3P53794 718 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 RAB10P61026 200 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 CDH17Q12864 832 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 PIN1Q13526 163 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 REP15Q6BDI9 236 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 NLRC3Q7RTR2 1065 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 NKAPQ8N5F7 415 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ATPAF2Q8N5M1 289 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 NUDT8Q8WV74 236 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ISL2Q96A47 359 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 FCRL2Q96LA5 508 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TBL1YQ9BQ87 522 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ACAT2Q9BWD1 397 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 PAIP1Q9H074 479 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 RHOJQ9H4E5 214 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 RBM22Q9NW64 420 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TMEM161AQ9NX61 479 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 PRPF19Q9UMS4 504 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 FADS3Q9Y5Q0 445 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ACTL7AQ9Y615 435 aa11.47□□□□□ -0.57
CDK5RAP3-231ENST00000584063 J3KR12 359 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 NR5A2O00482 541 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 UBDO15205 165 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 KMOO15229 486 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 MAFKO60675 156 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 MAPKAPK2P49137 400 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ECT2LQ008S8 904 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 DOC2AQ14183 400 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 KIF19Q2TAC6 998 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 C1orf185Q5T7R7 199 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 DEPDC1Q5TB30 811 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SHEQ5VZ18 495 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 METTL21CQ5VZV1 264 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 HMBOX1Q6NT76 420 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ELMSAN1Q6PJG2 1045 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 PRSS55Q6UWB4 352 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TAS1R1Q7RTX1 841 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 HEATR4Q86WZ0 1026 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SPPL2CQ8IUH8 684 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 NUP93Q8N1F7 819 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ZNF786Q8N393 782 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SPPL2BQ8TCT7 592 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 METTL2AQ96IZ6 378 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 GPR78Q96P69 363 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 C9orf16Q9BUW7 83 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SARGQ9BW04 601 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 FSD1LQ9BXM9 530 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 IFT22Q9H7X7 185 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TMEM39AQ9NV64 488 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 MRPL39Q9NYK5 338 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 EBF1Q9UH73 591 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ADAM28Q9UKQ2 775 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SESN1Q9Y6P5 492 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 MYO9BQ13459 2157 aa11.46□□□□□ -0.57
CDK5RAP3-231ENST00000584063 M0QZQ0 153 aa11.46□□□□□ -0.58
CDK5RAP3-231ENST00000584063 MASP2O00187 686 aa11.46□□□□□ -0.58
CDK5RAP3-231ENST00000584063 PSMD12O00232 456 aaPredicted RBP11.46□□□□□ -0.58
CDK5RAP3-231ENST00000584063 TRMUO75648 421 aaKnown RBP11.46□□□□□ -0.58
CDK5RAP3-231ENST00000584063 CNTN5O94779 1100 aa11.46□□□□□ -0.58
CDK5RAP3-231ENST00000584063 HMBSP08397 361 aa11.46□□□□□ -0.58
CDK5RAP3-231ENST00000584063 PRSS56P0CW18 603 aa11.46□□□□□ -0.58
CDK5RAP3-231ENST00000584063 EDN3P14138 238 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms