RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 PRPSAP1Q14558 356 aa20.06■□□□□ 0.8
SHMT1-209ENST00000582653 TAF1AQ15573 450 aaPredicted RBP20.06■□□□□ 0.8
SHMT1-209ENST00000582653 CRTC2Q53ET0 693 aaPredicted RBP20.06■□□□□ 0.8
SHMT1-209ENST00000582653 FNBP1LQ5T0N5 605 aa20.06■□□□□ 0.8
SHMT1-209ENST00000582653 TMEM139Q8IV31 216 aa20.06■□□□□ 0.8
SHMT1-209ENST00000582653 UNC5BQ8IZJ1 945 aa20.06■□□□□ 0.8
SHMT1-209ENST00000582653 ESX1Q8N693 406 aa20.06■□□□□ 0.8
SHMT1-209ENST00000582653 ZDHHC12Q96GR4 267 aa20.06■□□□□ 0.8
SHMT1-209ENST00000582653 ZCCHC2Q9C0B9 1178 aaKnown RBP20.06■□□□□ 0.8
SHMT1-209ENST00000582653 ZNF768Q9H5H4 540 aaKnown RBP20.06■□□□□ 0.8
SHMT1-209ENST00000582653 C2orf81A6NN90 581 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 STK10O94804 968 aaKnown RBP20.05■□□□□ 0.8
SHMT1-209ENST00000582653 MSH3P20585 1137 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 AKT1P31749 480 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 CETN2P41208 172 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 HALP42357 657 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 SH3BP2P78314 561 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 TMPRSS15P98073 1019 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 MC1RQ01726 317 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 DMPKQ09013 629 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 MICALCLQ6ZW33 695 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 OR13C4Q8NGS5 318 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 GPR150Q8NGU9 434 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 KLHL6Q8WZ60 621 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 SPATA13Q96N96 652 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 DESI2Q9BSY9 194 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 ASB8Q9H765 288 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 SMOXQ9NWM0 555 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 AMFRQ9UKV5 643 aa20.05■□□□□ 0.8
SHMT1-209ENST00000582653 C5orf60A6NFR6 353 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 RASSF9O75901 435 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 SRP72O76094 671 aaKnown RBP20.04■□□□□ 0.8
SHMT1-209ENST00000582653 STAT5AP42229 794 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 CAPZBP47756 277 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 XIAPP98170 497 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 RPE65Q16518 533 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 DENND5AQ6IQ26 1287 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 FAM92BQ6ZTR7 304 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 PEX26Q7Z412 305 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 PRSS42Q7Z5A4 293 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 OR6C1Q96RD1 312 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 TBL1YQ9BQ87 522 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 FAM96AQ9H5X1 160 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 FAM8A1Q9UBU6 413 aa20.04■□□□□ 0.8
SHMT1-209ENST00000582653 CFAP20Q9Y6A4 193 aaKnown RBP20.04■□□□□ 0.8
SHMT1-209ENST00000582653 CCL22O00626 93 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 FTCDO95954 541 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 FGF5P12034 268 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 ZNF28P17035 718 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 TCN2P20062 427 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 PPP1CAP62136 330 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 CDC20Q12834 499 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 LONRF2Q1L5Z9 754 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 CACHD1Q5VU97 1274 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 IRGCQ6NXR0 463 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 C6orf15Q6UXA7 325 aaPredicted RBP20.03■□□□□ 0.8
SHMT1-209ENST00000582653 STARD8Q92502 1023 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 ELMO2Q96JJ3 720 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 ULBP3Q9BZM4 244 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 TRIM4Q9C037 500 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 SEMA5BQ9P283 1151 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 RPS6KL1Q9Y6S9 549 aa20.03■□□□□ 0.8
SHMT1-209ENST00000582653 GOLGA6L3A6NEY3 463 aa20.02■□□□□ 0.8
SHMT1-209ENST00000582653 DDX3YO15523 660 aaKnown RBP20.02■□□□□ 0.8
SHMT1-209ENST00000582653 CRTAMO95727 393 aa20.02■□□□□ 0.8
SHMT1-209ENST00000582653 PTMAP06454 111 aaKnown RBP20.02■□□□□ 0.8
SHMT1-209ENST00000582653 PRKAR1AP10644 381 aa20.02■□□□□ 0.8
SHMT1-209ENST00000582653 F8A1P23610 371 aa20.02■□□□□ 0.8
SHMT1-209ENST00000582653 KIF5AQ12840 1032 aa20.02■□□□□ 0.8
SHMT1-209ENST00000582653 METRNLQ641Q3 311 aa20.02■□□□□ 0.8
SHMT1-209ENST00000582653 FAM71DQ8N9W8 422 aa20.02■□□□□ 0.8
SHMT1-209ENST00000582653 SPC24Q8NBT2 197 aa20.02■□□□□ 0.8
SHMT1-209ENST00000582653 APOBEC4Q8WW27 367 aaKnown RBP20.02■□□□□ 0.8
SHMT1-209ENST00000582653 ZNF514Q96K75 400 aaPredicted RBP20.02■□□□□ 0.8
SHMT1-209ENST00000582653 INSM2Q96T92 566 aaPredicted RBP20.02■□□□□ 0.8
SHMT1-209ENST00000582653 WWP1Q9H0M0 922 aa20.02■□□□□ 0.8
SHMT1-209ENST00000582653 IMP3Q9NV31 184 aaKnown RBP20.02■□□□□ 0.8
SHMT1-209ENST00000582653 R3HDM2Q9Y2K5 976 aaKnown RBP20.02■□□□□ 0.8
SHMT1-209ENST00000582653 TCRBV7S2A1N4TA0A589 114 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 MGAT4DA6NG13 374 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 SGTAO43765 313 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 METTL18O95568 372 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 TPH1P17752 444 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 NELFEP18615 380 aaKnown RBP20.01■□□□□ 0.79
SHMT1-209ENST00000582653 OAS2P29728 719 aaKnown RBP20.01■□□□□ 0.79
SHMT1-209ENST00000582653 DUS1LQ6P1R4 473 aaKnown RBP20.01■□□□□ 0.79
SHMT1-209ENST00000582653 CYB5D1Q6P9G0 228 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 PTRH1Q86Y79 214 aaKnown RBP20.01■□□□□ 0.79
SHMT1-209ENST00000582653 RASGRP3Q8IV61 690 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 TAB3Q8N5C8 712 aaPredicted RBP20.01■□□□□ 0.79
SHMT1-209ENST00000582653 UBL4BQ8N7F7 174 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 SPDYE1Q8NFV5 336 aaPredicted RBP20.01■□□□□ 0.79
SHMT1-209ENST00000582653 ARNT2Q9HBZ2 717 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 CRLS1Q9UJA2 301 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 PCDHB3Q9Y5E6 796 aa20.01■□□□□ 0.79
SHMT1-209ENST00000582653 GOLGA6L9A6NEM1 432 aa20■□□□□ 0.79
SHMT1-209ENST00000582653 AGAP14A8MT82 685 aa20■□□□□ 0.79
SHMT1-209ENST00000582653 LDB2O43679 373 aa20■□□□□ 0.79
SHMT1-209ENST00000582653 SPAG6O75602 509 aa20■□□□□ 0.79
SHMT1-209ENST00000582653 KIAA0754O94854 1291 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms