RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MSH2P43246 934 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 EIF4A2Q14240 407 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 KIR2DS3Q14952 304 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 KIR2DS5Q14953 304 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 RAB6CQ53S08 254 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 TCTEX1D4Q5JR98 221 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 ACSM2BQ68CK6 577 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 PACS1Q6VY07 963 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 TSPAN33Q86UF1 283 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 GCSAMQ8N6F7 178 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 C1orf52Q8N6N3 182 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 RDM1Q8NG50 284 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 GAD1Q99259 594 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 SLX1AQ9BQ83 275 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 PSD2Q9BQI7 771 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 RAB6CQ9H0N0 254 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 SEMA6AQ9H2E6 1030 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 UNC45AQ9H3U1 944 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 BICC1Q9H694 974 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 DIAPH3Q9NSV4 1193 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 SLC38A7Q9NVC3 462 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 FAM120CQ9NX05 1096 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 PTTG2Q9NZH5 202 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 ASIC3Q9UHC3 531 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 TMEM184BQ9Y519 407 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 PRRC2AP48634 2157 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 A0A0G2JLW4 131 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 TMEM189-UBE2V1I3L0A0 370 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 J3QR06 171 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 SMAD9O15198 467 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 OGG1O15527 345 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 ZNF217O75362 1048 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 RNASEH2AO75792 299 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 MBD4O95243 580 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 CAVIN2O95810 425 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 HIST1H2ABP04908 130 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 DNAH10OSP0CZ25 163 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 MSH3P20585 1137 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 HIST1H2ADP20671 130 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 ACADLP28330 430 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 PPARGP37231 505 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 GPR143P51810 404 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 CTSCP53634 463 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 UBE2V1Q13404 147 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 TUBB2AQ13885 445 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 KRT32Q14532 448 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 ASPRV1Q53RT3 343 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 NDUFAF5Q5TEU4 345 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 HAUS3Q68CZ6 603 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 CCDC70Q6NSX1 233 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 ZNF613Q6PF04 617 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 ZNF790Q6PG37 636 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 CLEC17AQ6ZS10 378 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 HIST3H2AQ7L7L0 130 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 DDHD1Q8NEL9 900 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 TRPC4APQ8TEL6 797 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 PRMT6Q96LA8 375 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 NUDCD1Q96RS6 583 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 GFI1Q99684 422 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 MCRIP2Q9BUT9 160 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 TUBB2BQ9BVA1 445 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 OLA1Q9NTK5 396 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 MTMR6Q9Y217 621 aa3.01□□□□□ -1.93
SMCHD1-206ENST00000581631 DUXAA6NLW8 204 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 H0YIN7 160 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 PLK4O00444 970 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 SCAMP1O15126 338 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 GPC4O75487 556 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 CEACAM1P13688 526 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 TMEM11P17152 192 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 CDH2P19022 906 aaPredicted RBP3□□□□□ -1.93
SMCHD1-206ENST00000581631 CHMP24386 653 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 HOXA13P31271 388 aaPredicted RBP3□□□□□ -1.93
SMCHD1-206ENST00000581631 MAN1A1P33908 653 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 MMP15P51511 669 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 MVPQ14764 893 aaKnown RBP3□□□□□ -1.93
SMCHD1-206ENST00000581631 MEP1AQ16819 746 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 DUOXA1Q1HG43 343 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 ASTE1Q2TB18 679 aaPredicted RBP3□□□□□ -1.93
SMCHD1-206ENST00000581631 SNAI3Q3KNW1 292 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 SNX30Q5VWJ9 437 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 KLHL35Q6PF15 583 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 IKBIPQ70UQ0 350 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 PTOV1Q86YD1 416 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 CEP97Q8IW35 865 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 HACE1Q8IYU2 909 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 CMTM3Q96MX0 182 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 NCAPGQ9BPX3 1015 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 ITPAQ9BY32 194 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 MUC13Q9H3R2 512 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 PLK3Q9H4B4 646 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 RAD21L1Q9H4I0 556 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 SH2D4AQ9H788 454 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 APOBEC3GQ9HC16 384 aaKnown RBP3□□□□□ -1.93
SMCHD1-206ENST00000581631 KRT84Q9NSB2 600 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 SMC4Q9NTJ3 1288 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 RCC2Q9P258 522 aaKnown RBP3□□□□□ -1.93
SMCHD1-206ENST00000581631 TSPYL4Q9UJ04 414 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms