RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CUL1Q13616 776 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 CRYMQ14894 314 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 LONRF1Q17RB8 773 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 ISXQ2M1V0 245 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 BBS9Q3SYG4 887 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 KHDC1Q4VXA5 237 aaKnown RBP9.73□□□□□ -0.85
GGA3-209ENST00000580646 RNF187Q5TA31 235 aaPredicted RBP9.73□□□□□ -0.85
GGA3-209ENST00000580646 ZNF449Q6P9G9 518 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 OGFOD3Q6PK18 319 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 DOK6Q6PKX4 331 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 CYS1Q717R9 158 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 LRRC6Q86X45 466 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 RELL1Q8IUW5 271 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 ZNF547Q8IVP9 402 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 CNTN4Q8IWV2 1026 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 PIANPQ8IYJ0 282 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 ARL10Q8N8L6 244 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 RASGEF1AQ8N9B8 481 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 EIF1ADQ8N9N8 165 aaKnown RBP9.73□□□□□ -0.85
GGA3-209ENST00000580646 KYQ8NBH2 561 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.73□□□□□ -0.85
GGA3-209ENST00000580646 FAM46DQ8NEK8 389 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 GPR156Q8NFN8 814 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 WDR48Q8TAF3 677 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 CALML6Q8TD86 181 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 HNRNPLLQ8WVV9 542 aaKnown RBP9.73□□□□□ -0.85
GGA3-209ENST00000580646 ANKRD7Q92527 254 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 DCUN1D1Q96GG9 259 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 FCRL3Q96P31 734 aaPredicted RBP9.73□□□□□ -0.85
GGA3-209ENST00000580646 CCDC3Q9BQI4 270 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 TMEM168Q9H0V1 697 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 EPB41L5Q9HCM4 733 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 ZDHHC18Q9NUE0 388 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 VPS9D1Q9Y2B5 631 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 MAD1L1Q9Y6D9 718 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 ASH1LQ9NR48 2969 aaKnown RBP9.73□□□□□ -0.85
GGA3-209ENST00000580646 A0A087WV48 116 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 C17orf113A0A1B0GUU1 675 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 OR51F1A6NGY5 319 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 TLX3O43711 291 aaPredicted RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 TCEA3O75764 348 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 VAPBO95292 243 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 ZNF7P17097 686 aaPredicted RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 VCLP18206 1134 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 RPS3P23396 243 aaKnown RBP eCLIP9.72□□□□□ -0.85
GGA3-209ENST00000580646 AKT1P31749 480 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 CDKN1CP49918 316 aaPredicted RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 CTBSQ01459 385 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 ILF2Q12905 390 aaKnown RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 PDIA2Q13087 525 aaKnown RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 DBN1Q16643 649 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 COL28A1Q2UY09 1125 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 NEPROQ6NW34 567 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 RBM44Q6ZP01 1051 aaKnown RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 TAS2R42Q7RTR8 314 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 C11orf96Q7Z7L8 435 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 GALNT7Q86SF2 657 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 SDCCAG8Q86SQ7 713 aaPredicted RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 CILP2Q8IUL8 1156 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 IFT20Q8IY31 132 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 FBXO36Q8NEA4 188 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 OR6C4Q8NGE1 309 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 CCL4L1Q8NHW4 92 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 FGF11Q92914 225 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 CCDC74AQ96AQ1 378 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 GRAMD1AQ96CP6 724 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 DCBLD2Q96PD2 775 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 WDR83Q9BRX9 315 aaKnown RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 FAM167BQ9BTA0 163 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 VPS37BQ9H9H4 285 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 INTS10Q9NVR2 710 aaKnown RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 MTRF1LQ9UGC7 380 aaKnown RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 ZC3H7BQ9UGR2 993 aaKnown RBP9.72□□□□□ -0.85
GGA3-209ENST00000580646 ZNHIT2Q9UHR6 403 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 ASXL3Q9C0F0 2248 aa9.72□□□□□ -0.85
GGA3-209ENST00000580646 ESYT3A0FGR9 886 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 NTN3O00634 580 aaPredicted RBP9.71□□□□□ -0.86
GGA3-209ENST00000580646 PRMT5O14744 637 aaPredicted RBP9.71□□□□□ -0.86
GGA3-209ENST00000580646 CASC3O15234 703 aaKnown RBP9.71□□□□□ -0.86
GGA3-209ENST00000580646 SGTAO43765 313 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 NOBOXO60393 691 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 MTX2O75431 263 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 BANF1O75531 89 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 SPAG6O75602 509 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 SLU7O95391 586 aaKnown RBP9.71□□□□□ -0.86
GGA3-209ENST00000580646 MPOP05164 745 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 SLC2A4P14672 509 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 TNFRSF8P28908 595 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 ECHS1P30084 290 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 EIF2S3P41091 472 aaKnown RBP9.71□□□□□ -0.86
GGA3-209ENST00000580646 LSSP48449 732 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 GABREP78334 506 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 THOC5Q13769 683 aaKnown RBP9.71□□□□□ -0.86
GGA3-209ENST00000580646 SPIDRQ14159 915 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 SEMA3AQ14563 771 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 TRADDQ15628 312 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 TBC1D25Q3MII6 688 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 ZNF648Q5T619 568 aaPredicted RBP9.71□□□□□ -0.86
GGA3-209ENST00000580646 TMEM220Q6QAJ8 160 aa9.71□□□□□ -0.86
GGA3-209ENST00000580646 CES3Q6UWW8 571 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms