RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	PLEKHS1	Q5SXH7	462 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	TMTC4	Q5T4D3	741 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	AFMID	Q63HM1	303 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	DENND2C	Q68D51	928 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	SPOCD1	Q6ZMY3	1216 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	TMEM26	Q6ZUK4	368 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	MARK2	Q7KZI7	788 aa	Known RBP	5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	DPPA4	Q7L190	304 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	CHST15	Q7LFX5	561 aa	Predicted RBP	5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	TMEM110	Q86TL2	294 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	KMT5C	Q86Y97	462 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	ZNF683	Q8IZ20	524 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	EID3	Q8N140	333 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	PELI3	Q8N2H9	469 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	TAB3	Q8N5C8	712 aa	Predicted RBP	5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	WFDC11	Q8NEX6	87 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	ADAMTS18	Q8TE60	1221 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	TEKT4	Q8WW24	435 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	SDCCAG3	Q96C92	435 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	RMND5B	Q96G75	393 aa	Predicted RBP	5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	MAGED4	Q96JG8	741 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	SLC2A13	Q96QE2	648 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	TUBGCP5	Q96RT8	1024 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	SECISBP2	Q96T21	854 aa	Known RBP	5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	C17orf62	Q9BQA9	187 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	DPH2	Q9BQC3	489 aa	Predicted RBP	5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	NDC1	Q9BTX1	674 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	TUBB2B	Q9BVA1	445 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	POLDIP3	Q9BY77	421 aa	Known RBP	5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	RETREG1	Q9H6L5	497 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	FANCE	Q9HB96	536 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	ASNSD1	Q9NWL6	643 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	P4HTM	Q9NXG6	502 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	OGFR	Q9NZT2	677 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	VTI1B	Q9UEU0	232 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	EPHA6	Q9UF33	1036 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	TBC1D29	Q9UFV1	150 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	GPN3	Q9UHW5	284 aa	Predicted RBP	5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	ADAM21	Q9UKJ8	722 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	PLEKHA6	Q9Y2H5	1048 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	TMEM98	Q9Y2Y6	226 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	MEMO1	Q9Y316	297 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	SNX10	Q9Y5X0	201 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	HIVEP2	P31629	2446 aa		5.85	□□□□□ -1.47
KPNB1-209	ENST00000580158	IGHV5-51	A0A0C4DH38	117 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	CCDC78	A2IDD5	438 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	INAFM1	C9JVW0	142 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	INSIG1	O15503	277 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	PROM1	O43490	865 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	MED7	O43513	233 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	RAMP2	O60895	175 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	GRAP2	O75791	330 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	IFNA2	P01563	188 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	MYBL2	P10244	700 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	XRCC1	P18887	633 aa	Predicted RBP	5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	NR2F2	P24468	414 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	TEAD1	P28347	426 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	FOLR3	P41439	243 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	CAPZB	P47756	277 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	MAPKAPK2	P49137	400 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	CXCR3	P49682	368 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	SNX16	P57768	344 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	ARG2	P78540	354 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	HSD11B2	P80365	405 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	DEUP1	Q05D60	604 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	ADCY2	Q08462	1091 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	TAF5	Q15542	800 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	C3AR1	Q16581	482 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	PRAMEF13	Q5VWM6	474 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	LCN10	Q6JVE6	187 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	PODNL1	Q6PEZ8	512 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	CAMK1D	Q8IU85	385 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	SYTL1	Q8IYJ3	562 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	TTC30B	Q8N4P2	665 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	IQUB	Q8NA54	791 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	SLC38A9	Q8NBW4	561 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	SIMC1	Q8NDZ2	872 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	GOT1L1	Q8NHS2	421 aa	Predicted RBP	5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	SHC3	Q92529	594 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	DHX58	Q96C10	678 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	MBD6	Q96DN6	1003 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	SLC41A2	Q96JW4	573 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	EXOC2	Q96KP1	924 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	DMRTB1	Q96MA1	342 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	LMF1	Q96S06	567 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	TRIM56	Q9BRZ2	755 aa	Known RBP	5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	KRTAP4-7	Q9BYR0	210 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	RAB33B	Q9H082	229 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	KCTD10	Q9H3F6	313 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	ATP13A3	Q9H7F0	1226 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	RAD18	Q9NS91	495 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	DNAI1	Q9UI46	699 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	TINAG	Q9UJW2	476 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	STAP1	Q9ULZ2	295 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	CLIC4	Q9Y696	253 aa		5.84	□□□□□ -1.47
KPNB1-209	ENST00000580158	TRAV17	A0A0B4J275	112 aa		5.83	□□□□□ -1.48
KPNB1-209	ENST00000580158	UBA6	A0AVT1	1052 aa	Predicted RBP	5.83	□□□□□ -1.48
KPNB1-209	ENST00000580158	DYTN	A2CJ06	578 aa		5.83	□□□□□ -1.48

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