RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 NTAN1Q96AB6 310 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 SDCCAG3Q96C92 435 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 THOC3Q96J01 351 aaKnown RBP10.73□□□□□ -0.69
GGA3-206ENST00000578773 C18orf12Q96KH6 178 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 IP6K3Q96PC2 410 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 PSKH2Q96QS6 385 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 ZNF559Q9BR84 538 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 TSPAN10Q9H1Z9 355 aaPredicted RBP10.73□□□□□ -0.69
GGA3-206ENST00000578773 CARD9Q9H257 536 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 EPS8L2Q9H6S3 715 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 SP110Q9HB58 689 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 PSMD13Q9UNM6 376 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 PPIL1Q9Y3C6 166 aa10.73□□□□□ -0.69
GGA3-206ENST00000578773 CFAP20Q9Y6A4 193 aaKnown RBP10.73□□□□□ -0.69
GGA3-206ENST00000578773 PHF3Q92576 2039 aaKnown RBP10.72□□□□□ -0.69
GGA3-206ENST00000578773 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.72□□□□□ -0.69
GGA3-206ENST00000578773 FOXN3O00409 490 aaPredicted RBP10.72□□□□□ -0.69
GGA3-206ENST00000578773 ADAM10O14672 748 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 KLHL41O60662 606 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 PEX11BO96011 259 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 PVRP15151 417 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 TFF3Q07654 80 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 LBRQ14739 615 aaKnown RBP10.72□□□□□ -0.69
GGA3-206ENST00000578773 CA9Q16790 459 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 KRBA2Q6ZNG9 492 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 FAM83HQ6ZRV2 1179 aaPredicted RBP10.72□□□□□ -0.69
GGA3-206ENST00000578773 USP45Q70EL2 814 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 SLFN11Q7Z7L1 901 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 DNAAF3Q8N9W5 541 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 TMEM35BQ8NCS4 154 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 COG1Q8WTW3 980 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 NINJ1Q92982 152 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 NUDCD1Q96RS6 583 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 DHRS4Q9BTZ2 278 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 UCK2Q9BZX2 261 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 RMI1Q9H9A7 625 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 SIX2Q9NPC8 291 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 C1GALT1Q9NS00 363 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 SLC22A11Q9NSA0 550 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 HRASLS2Q9NWW9 162 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 ABI3Q9P2A4 366 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 DHCR7Q9UBM7 475 aaKnown RBP10.72□□□□□ -0.69
GGA3-206ENST00000578773 FZD10Q9ULW2 581 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 ZNF835Q9Y2P0 537 aa10.72□□□□□ -0.69
GGA3-206ENST00000578773 OR6C74A6NCV1 312 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 INAFM1C9JVW0 142 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 CHUKO15111 745 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 FZD6O60353 706 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 MTA2O94776 668 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 ZNF202O95125 648 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 ST6GAL1P15907 406 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 SDC4P31431 198 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 SYKP43405 635 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 TNFSF10P50591 281 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 SNX16P57768 344 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 CETN1Q12798 172 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 GALNT3Q14435 633 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 RPE65Q16518 533 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 DEFB110Q30KQ9 67 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 TMTC4Q5T4D3 741 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 AGAP9Q5VTM2 703 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 NAA35Q5VZE5 725 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 MRPL14Q6P1L8 145 aaKnown RBP10.71□□□□□ -0.69
GGA3-206ENST00000578773 ISLR2Q6UXK2 745 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 SHISA6Q6ZSJ9 500 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 STRADAQ7RTN6 431 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 C11orf96Q7Z7L8 435 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 NLRP8Q86W28 1048 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 CIARTQ8N365 385 aaPredicted RBP10.71□□□□□ -0.69
GGA3-206ENST00000578773 LHPPQ9H008 270 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 CATSPERBQ9H7T0 1116 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 DNAJB12Q9NXW2 375 aaKnown RBP10.71□□□□□ -0.69
GGA3-206ENST00000578773 LRFN1Q9P244 771 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 HS3ST3B1Q9Y662 390 aa10.71□□□□□ -0.69
GGA3-206ENST00000578773 A0A0J9YYE9 177 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 ARHGAP42A6NI28 874 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 FAM90A27PA6NNH2 459 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 H3BMH7 237 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 CCP110O43303 1012 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 TRBC1P01850 177 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 IGHEP01854 428 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 UNGP13051 313 aaPredicted RBP10.7□□□□□ -0.7
GGA3-206ENST00000578773 POLR2CP19387 275 aaPredicted RBP10.7□□□□□ -0.7
GGA3-206ENST00000578773 ITGAXP20702 1163 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 AGXTP21549 392 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 CMA1P23946 247 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 PTPN9P43378 593 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 NOMO3P69849 1222 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 ARG2P78540 354 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 TMPRSS15P98073 1019 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 HSF1Q00613 529 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 LRRC63Q05C16 580 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 IL10RBQ08334 325 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 ALS2CLQ60I27 953 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 ISM2Q6H9L7 571 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 SCYL2Q6P3W7 929 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 KIRREL2Q6UWL6 708 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 CDHR3Q6ZTQ4 885 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 ENOSF1Q7L5Y1 443 aa10.7□□□□□ -0.7
GGA3-206ENST00000578773 ARCQ7LC44 396 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms