RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 RCN2Q14257 317 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 CFAP157Q5JU67 520 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 FRA10AC1Q70Z53 315 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 TRIM69Q86WT6 500 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 GPSM1Q86YR5 675 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 SIX5Q8N196 739 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 OR2T34Q8NGX1 318 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 L3HYPDHQ96EM0 354 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 CCM2Q9BSQ5 444 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 TEX101Q9BY14 249 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 FAM126AQ9BYI3 521 aaPredicted RBP18.25■□□□□ 0.51
PRKCA-203ENST00000578063 C20orf27Q9GZN8 174 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 WDR26Q9H7D7 661 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 CYP4F12Q9HCS2 524 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 ITM2CQ9NQX7 267 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 FAM170BA6NMN3 283 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 LYPLA1O75608 230 aaPredicted RBP18.24■□□□□ 0.51
PRKCA-203ENST00000578063 IGLV3-19P01714 112 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 MPC1LP0DKB6 136 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 HSPA14Q0VDF9 509 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 NEK10Q6ZWH5 1172 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 PGBD3Q8N328 593 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 FBXO39Q8N4B4 442 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 BEND7Q8N7W2 519 aaPredicted RBP18.24■□□□□ 0.51
PRKCA-203ENST00000578063 PTGR2Q8N8N7 351 aaPredicted RBP18.24■□□□□ 0.51
PRKCA-203ENST00000578063 PHF21BQ96EK2 531 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 TMEM237Q96Q45 408 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 SORT1Q99523 831 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 ZNF395Q9H8N7 513 aaPredicted RBP18.24■□□□□ 0.51
PRKCA-203ENST00000578063 NPHS2Q9NP85 383 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 MBNL1Q9NR56 388 aaKnown RBP18.24■□□□□ 0.51
PRKCA-203ENST00000578063 NUDT4Q9NZJ9 180 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 ATXN10Q9UBB4 475 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 GPR34Q9UPC5 381 aa18.24■□□□□ 0.51
PRKCA-203ENST00000578063 GPR89AB7ZAQ6 455 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 KLK8O60259 260 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 GPR89BP0CG08 455 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 IMPDH1P20839 514 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 TRIM23P36406 574 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 PPP2CBP62714 309 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 HERVK_113P63132 956 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 PPP2CAP67775 309 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 FZD5Q13467 585 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 INPP5AQ14642 412 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 SYTL3Q4VX76 610 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 SBSNQ6UWP8 590 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 CYHR1Q6ZMK1 362 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 TRAPPC5Q8IUR0 188 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 CCNYL1Q8N7R7 359 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 DENND6BQ8NEG7 585 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 TSTD1Q8NFU3 115 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 CNDP1Q96KN2 507 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 LINC00615Q96LM1 132 aaPredicted RBP18.23■□□□□ 0.51
PRKCA-203ENST00000578063 PLCD4Q9BRC7 762 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 SIKE1Q9BRV8 207 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 ERVK-6Q9BXR3 956 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 FOXQ1Q9C009 403 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 PHPT1Q9NRX4 125 aaPredicted RBP18.23■□□□□ 0.51
PRKCA-203ENST00000578063 TSR3Q9UJK0 312 aaKnown RBP18.23■□□□□ 0.51
PRKCA-203ENST00000578063 ARL2BPQ9Y2Y0 163 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 STX16-NPEPL1H3BU86 382 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 STX16O14662 325 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 SNX2O60749 519 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 LILRB5O75023 590 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 GPC4O75487 556 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 ARRB2P32121 409 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 ACSL1P33121 698 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 NAA20P61599 178 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 TGFBIQ15582 683 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 ZSCAN26Q16670 478 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 PPP1R3AQ16821 1122 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 PFKFB4Q16877 469 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 ZNF771Q7L3S4 317 aaPredicted RBP18.23■□□□□ 0.51
PRKCA-203ENST00000578063 PIWIL2Q8TC59 973 aaKnown RBP18.23■□□□□ 0.51
PRKCA-203ENST00000578063 KLK6Q92876 244 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 GLMNQ92990 594 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 TMEM159Q96B96 161 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 TRMOQ9BU70 441 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 CD93Q9NPY3 652 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 DNAJC16Q9Y2G8 782 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 OARD1Q9Y530 152 aa18.23■□□□□ 0.51
PRKCA-203ENST00000578063 TRPM6Q9BX84 2022 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 EBAG9O00559 213 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 RAD51BO15315 384 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 SLCO2B1O94956 709 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 C8GP07360 202 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 MYCLP1P12525 358 aaPredicted RBP18.22■□□□□ 0.51
PRKCA-203ENST00000578063 ZNF8P17098 575 aaPredicted RBP18.22■□□□□ 0.51
PRKCA-203ENST00000578063 MAT2AP31153 395 aaKnown RBP18.22■□□□□ 0.51
PRKCA-203ENST00000578063 ALDH18A1P54886 795 aaKnown RBP18.22■□□□□ 0.51
PRKCA-203ENST00000578063 SP140Q13342 867 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 GAS6Q14393 721 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 ZNF678Q5SXM1 525 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 ANO7Q6IWH7 933 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 WDR75Q8IWA0 830 aaKnown RBP18.22■□□□□ 0.51
PRKCA-203ENST00000578063 TBC1D17Q9HA65 648 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 CD274Q9NZQ7 290 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 EBF1Q9UH73 591 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 CDYLQ9Y232 598 aa18.22■□□□□ 0.51
PRKCA-203ENST00000578063 RAP2CQ9Y3L5 183 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms