RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 LIPFP07098 398 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 LAMP2P13473 410 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 ATP1A3P13637 1013 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 PAX3P23760 479 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 IRX1P78414 480 aaPredicted RBP2.21□□□□□ -2.06
TOP2A-202ENST00000577541 GOLGA8DPQ0D2H9 430 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 NAB2Q15742 525 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 ASTE1Q2TB18 679 aaPredicted RBP2.21□□□□□ -2.06
TOP2A-202ENST00000577541 ACSM2BQ68CK6 577 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 PTOV1Q86YD1 416 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 PLD3Q8IV08 490 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 CEP97Q8IW35 865 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 PAF1Q8N7H5 531 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 L3MBTL4Q8NA19 623 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 OR8K5Q8NH50 307 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 HCAR2Q8TDS4 363 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 FAM222BQ8WU58 562 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 OXNAD1Q96HP4 312 aaPredicted RBP2.21□□□□□ -2.06
TOP2A-202ENST00000577541 POM121L2Q96KW2 1035 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 WDFY2Q96P53 400 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 OR2A14Q96R47 310 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 SEMA3CQ99985 751 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 RTP3Q9BQQ7 232 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 PDCL3Q9H2J4 239 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 FGF22Q9HCT0 170 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 SIX2Q9NPC8 291 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 ZNF71Q9NQZ8 489 aaPredicted RBP2.21□□□□□ -2.06
TOP2A-202ENST00000577541 C9orf78Q9NZ63 289 aaPredicted RBP2.21□□□□□ -2.06
TOP2A-202ENST00000577541 JRKLQ9Y4A0 524 aa2.21□□□□□ -2.06
TOP2A-202ENST00000577541 ASTN2O75129 1339 aaPredicted RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 KIAA1210Q9ULL0 1709 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 ZNF646O15015 1829 aaPredicted RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 FAM237BA0A1B0GVD1 139 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 A0A1W2PR77 199 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 MEIOCA2RUB1 952 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 B4E171 279 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 OGG1O15527 345 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 PLPP2O43688 288 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 RTN3O95197 1032 aaPredicted RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 KCNK5O95279 499 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 OR2C1O95371 312 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 BMP10O95393 424 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 SPARCP09486 303 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 HSPA1AP0DMV8 641 aaKnown RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 HSPA1BP0DMV9 641 aaKnown RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 CEACAM1P13688 526 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 TM4SF1P30408 202 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 WNT5AP41221 380 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 TSPAN7P41732 249 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 THOP1P52888 689 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 RPS3AP61247 264 aaKnown RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 EIF4A2Q14240 407 aaKnown RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 TSTQ16762 297 aaKnown RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 NDUFAF5Q5TEU4 345 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 ZDHHC20Q5W0Z9 365 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 PXKQ7Z7A4 578 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 CCDC190Q86UF4 302 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 GALNT13Q8IUC8 556 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 MCEMP1Q8IX19 187 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 ANKRD52Q8NB46 1076 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 HJURPQ8NCD3 748 aaPredicted RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 DDHD1Q8NEL9 900 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 PPHLN1Q8NEY8 458 aaKnown RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 CCDC34Q96HJ3 373 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 ART5Q96L15 291 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 PRMT6Q96LA8 375 aaPredicted RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 C1QTNF1Q9BXJ1 281 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 BICC1Q9H694 974 aaKnown RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 PRR34Q9NV39 138 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 SETD4Q9NVD3 440 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 DBNLQ9UJU6 430 aaKnown RBP2.2□□□□□ -2.06
TOP2A-202ENST00000577541 NENFQ9UMX5 172 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 MTMR6Q9Y217 621 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 PYGO1Q9Y3Y4 419 aa2.2□□□□□ -2.06
TOP2A-202ENST00000577541 FLT1P17948 1338 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 IGHV4-61A0A0C4DH41 118 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 MAGEB17A8MXT2 336 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 PRR32B1ATL7 298 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 J3QR06 171 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 DCXO43602 365 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 SRSF10O75494 262 aaKnown RBP2.19□□□□□ -2.06
TOP2A-202ENST00000577541 KHDRBS3O75525 346 aaKnown RBP2.19□□□□□ -2.06
TOP2A-202ENST00000577541 AP2A2O94973 939 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 SCGB1D1O95968 90 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 AGR2O95994 175 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 GH2P01242 217 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 IGHV4-59P01825 116 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 FRMD6-AS1P0C7T7 363 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 TMEM11P17152 192 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 CEBPBP17676 345 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 GNAZP19086 355 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 ANXA7P20073 488 aaKnown RBP2.19□□□□□ -2.06
TOP2A-202ENST00000577541 PIK3CAP42336 1068 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 MSH2P43246 934 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 PPARDQ03181 441 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 ZFP69Q49AA0 526 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 ZNF613Q6PF04 617 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 TICAM1Q8IUC6 712 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 ZNF611Q8N823 705 aa2.19□□□□□ -2.06
TOP2A-202ENST00000577541 ZNF689Q96CS4 500 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms