RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SLC7A5P2Q9GIP4 190 aa13.04□□□□□ -0.32
COPS3-214ENST00000577246 AGPAT4Q9NRZ5 378 aa13.04□□□□□ -0.32
COPS3-214ENST00000577246 IMP3Q9NV31 184 aaKnown RBP13.04□□□□□ -0.32
COPS3-214ENST00000577246 ASF1BQ9NVP2 202 aa13.04□□□□□ -0.32
COPS3-214ENST00000577246 BTRCQ9Y297 605 aa13.04□□□□□ -0.32
COPS3-214ENST00000577246 DOPEY1Q5JWR5 2465 aa13.04□□□□□ -0.32
COPS3-214ENST00000577246 ESPL1Q14674 2120 aa13.04□□□□□ -0.32
COPS3-214ENST00000577246 KLHL33A6NCF5 533 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 KCNK1O00180 336 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 HNRNPRO43390 633 aaKnown RBP13.03□□□□□ -0.32
COPS3-214ENST00000577246 HBQ1P09105 142 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 PIRTP0C851 137 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 MTHFD1P11586 935 aaKnown RBP13.03□□□□□ -0.32
COPS3-214ENST00000577246 CYP2A7P20853 494 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 AGXTP21549 392 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 TNNT3P45378 269 aaPredicted RBP13.03□□□□□ -0.32
COPS3-214ENST00000577246 IFI35P80217 286 aaPredicted RBP13.03□□□□□ -0.32
COPS3-214ENST00000577246 CDK18Q07002 472 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 NCF4Q15080 339 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 SLC14A2Q15849 920 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 KYNUQ16719 465 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 LDLRAP1Q5SW96 308 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 CERS6Q6ZMG9 384 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 NT5DC3Q86UY8 548 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 SRRM1Q8IYB3 904 aaKnown RBP13.03□□□□□ -0.32
COPS3-214ENST00000577246 SYTL1Q8IYJ3 562 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 CISD2Q8N5K1 135 aaKnown RBP13.03□□□□□ -0.32
COPS3-214ENST00000577246 SLC38A9Q8NBW4 561 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 DTX3LQ8TDB6 740 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 RUBCNLQ9H714 662 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 ACTR5Q9H9F9 607 aaPredicted RBP13.03□□□□□ -0.32
COPS3-214ENST00000577246 COPG1Q9Y678 874 aaKnown RBP13.03□□□□□ -0.32
COPS3-214ENST00000577246 ITPR2Q14571 2701 aa13.03□□□□□ -0.32
COPS3-214ENST00000577246 PEX12O00623 359 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 POP7O75817 140 aaKnown RBP13.02□□□□□ -0.33
COPS3-214ENST00000577246 CD63P08962 238 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 MSL3P1P0C860 447 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 PYGMP11217 842 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 RORAP35398 523 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 GJC1P36383 396 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 HADHAP40939 763 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 ARSEP51690 589 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 GBE1Q04446 702 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 PPIDQ08752 370 aaKnown RBP13.02□□□□□ -0.33
COPS3-214ENST00000577246 ATP1A4Q13733 1029 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 PCSK7Q16549 785 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 STX1AQ16623 288 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 PLEKHN1Q494U1 663 aaPredicted RBP13.02□□□□□ -0.33
COPS3-214ENST00000577246 FILIP1LQ4L180 1135 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 ATP13A5Q4VNC0 1218 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 KHDC1Q4VXA5 237 aaKnown RBP13.02□□□□□ -0.33
COPS3-214ENST00000577246 IGFL3Q6UXB1 125 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 APTXQ7Z2E3 356 aaKnown RBP13.02□□□□□ -0.33
COPS3-214ENST00000577246 ZBTB2Q8N680 514 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 IMP4Q96G21 291 aaKnown RBP13.02□□□□□ -0.33
COPS3-214ENST00000577246 BTBD6Q96KE9 485 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 THAP2Q9H0W7 228 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 TRABDQ9H4I3 376 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 C1GALT1Q9NS00 363 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 LCMT1Q9UIC8 334 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 SERTAD3Q9UJW9 196 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 PSMD13Q9UNM6 376 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 BZW2Q9Y6E2 419 aaKnown RBP13.02□□□□□ -0.33
COPS3-214ENST00000577246 COLEC10Q9Y6Z7 277 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 SHANK1Q9Y566 2161 aa13.02□□□□□ -0.33
COPS3-214ENST00000577246 OR6C74A6NCV1 312 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 NDST3O95803 873 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 SLC35G4P0C7Q5 338 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 HLA-DPA1P20036 260 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 CDH3P22223 829 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 NDUFS1P28331 727 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 HMGCLP35914 325 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 ZBTB17Q13105 803 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 RAPSNQ13702 412 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 ITGA9Q13797 1035 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 KRT33BQ14525 404 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 MYBPC3Q14896 1274 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 LONRF2Q1L5Z9 754 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 METRNLQ641Q3 311 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 FAM198BQ6UWH4 519 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 ZADH2Q8N4Q0 377 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 CNTD1Q8N815 330 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 ST6GALNAC3Q8NDV1 305 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 UBE2Q2Q8WVN8 375 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 FAF2Q96CS3 445 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 C12orf66Q96MD2 445 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 TLR10Q9BXR5 811 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 SLC25A51Q9H1U9 297 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 KIR3DX1Q9H7L2 352 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 PCMTD2Q9NV79 361 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 CHMP5Q9NZZ3 219 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 SLC24A2Q9UI40 661 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 ACSL5Q9ULC5 683 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 ENTPD4Q9Y227 616 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 HEBP2Q9Y5Z4 205 aa13.01□□□□□ -0.33
COPS3-214ENST00000577246 TNRC6AQ8NDV7 1962 aaKnown RBP13.01□□□□□ -0.33
COPS3-214ENST00000577246 TMEM150CB9EJG8 249 aa13□□□□□ -0.33
COPS3-214ENST00000577246 PPP1R12AO14974 1030 aaPredicted RBP13□□□□□ -0.33
COPS3-214ENST00000577246 CYP1A2P05177 515 aa13□□□□□ -0.33
COPS3-214ENST00000577246 OTX2P32243 289 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms