RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 DBX2Q6ZNG2 339 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 FAM83HQ6ZRV2 1179 aaPredicted RBP8.42□□□□□ -1.06
NUP88-211ENST00000575976 KIAA0408Q6ZU52 694 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 TRMT10CQ7L0Y3 403 aaKnown RBP8.42□□□□□ -1.06
NUP88-211ENST00000575976 STRA8Q7Z7C7 330 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 AMZ2Q86W34 360 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 SLC26A11Q86WA9 606 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 LRRC6Q86X45 466 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 GKN2Q86XP6 184 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 SPNS2Q8IVW8 549 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 CTAGE3PQ8IX95 158 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 FSTL5Q8N475 847 aaPredicted RBP8.42□□□□□ -1.06
NUP88-211ENST00000575976 LILRA3Q8N6C8 439 aaPredicted RBP8.42□□□□□ -1.06
NUP88-211ENST00000575976 PPM1NQ8N819 430 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 OR2L2Q8NH16 312 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 NETO1Q8TDF5 533 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 CDKL2Q92772 493 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 BIRC8Q96P09 236 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 TIMM29Q9BSF4 260 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 CCM2Q9BSQ5 444 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 FUT8Q9BYC5 575 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 GSDMCQ9BYG8 508 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 SPATS2LQ9NUQ6 558 aaKnown RBP8.42□□□□□ -1.06
NUP88-211ENST00000575976 FAM8A1Q9UBU6 413 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 GNPTGQ9UJJ9 305 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 ANGPTL2Q9UKU9 493 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 DOLKQ9UPQ8 538 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 VPS9D1Q9Y2B5 631 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 PCDHB1Q9Y5F3 818 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 PCDHGB2Q9Y5G2 931 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 PSAT1Q9Y617 370 aa8.42□□□□□ -1.06
NUP88-211ENST00000575976 FLNBO75369 2602 aaKnown RBP8.41□□□□□ -1.06
NUP88-211ENST00000575976 TP53BP1Q12888 1972 aaPredicted RBP8.41□□□□□ -1.06
NUP88-211ENST00000575976 LRP4O75096 1905 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 A0A087WUV0 522 aaPredicted RBP8.41□□□□□ -1.06
NUP88-211ENST00000575976 C17orf113A0A1B0GUU1 675 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 NEMP2A6NFY4 417 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 PRR19A6NJB7 356 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 LMO7DNF2Z398 122 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 F8W8V4 182 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 TRIM38O00635 465 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 TPP1O14773 563 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 SH3BP5O60239 455 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 SNX2O60749 519 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 KCNJ13O60928 360 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 FAM155BO75949 473 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 TRIM16O95361 564 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 EML2O95834 649 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 ESR1P03372 595 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 TUBBP07437 444 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 VCLP18206 1134 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 CHRM3P20309 590 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 CCR7P32248 378 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 DMPKQ09013 629 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 SLC14A1Q13336 389 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 NFE2L1Q14494 772 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 BRD3Q15059 726 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 ZNF658BQ4V348 819 aaPredicted RBP8.41□□□□□ -1.06
NUP88-211ENST00000575976 RBM20Q5T481 1227 aaKnown RBP8.41□□□□□ -1.06
NUP88-211ENST00000575976 NAPRTQ6XQN6 538 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 GALNT7Q86SF2 657 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 SFTPA2Q8IWL1 248 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 CFAP206Q8IYR0 622 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 SDR16C5Q8N3Y7 309 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 EID2Q8N6I1 236 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 FAM46DQ8NEK8 389 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 HM13Q8TCT9 377 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 AENQ8WTP8 325 aaKnown RBP8.41□□□□□ -1.06
NUP88-211ENST00000575976 ELMO1Q92556 727 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 MRRFQ96E11 262 aaKnown RBP8.41□□□□□ -1.06
NUP88-211ENST00000575976 ATXN7L3BQ96GX2 97 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 PANX3Q96QZ0 392 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 NDNQ99608 321 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 AARSD1Q9BTE6 412 aaKnown RBP8.41□□□□□ -1.06
NUP88-211ENST00000575976 CCDC68Q9H2F9 335 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 EPB41L4BQ9H329 900 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 DPEP2Q9H4A9 486 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 OSGEPL1Q9H4B0 414 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 ACSS3Q9H6R3 686 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 PRDM8Q9NQV8 689 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 NSMCE4AQ9NXX6 385 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 TAAR2Q9P1P5 351 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 GALPQ9UBC7 116 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 TBC1D29Q9UFV1 150 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 BTBD3Q9Y2F9 522 aa8.41□□□□□ -1.06
NUP88-211ENST00000575976 CACNA1EQ15878 2313 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 TRBV23OR9-2A0A075B6M9 112 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 SLC5A10A0PJK1 596 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 KLHL33A6NCF5 533 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 A6NCN8 305 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 H3BMM5 538 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 FLRT2O43155 660 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 SIGLEC6O43699 453 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 ABHD2P08910 425 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 GSTM1P09488 218 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 ALPPL2P10696 532 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 MYF5P13349 255 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 BRAFP15056 766 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 IDSP22304 550 aa8.4□□□□□ -1.06
NUP88-211ENST00000575976 RPL10P27635 214 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms