RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CAMK1Q14012 370 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 PHKG1Q16816 387 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 HACD2Q6Y1H2 254 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 OR2T11Q8NH01 316 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 METTL6Q8TCB7 284 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 PHOSPHO2Q8TCD6 241 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 OTUB2Q96DC9 234 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 CCT7Q99832 543 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 IPPKQ9H8X2 491 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 SUCOQ9UBS9 1254 aaKnown RBP13.83□□□□□ -0.2
VPS33B-208ENST00000574755 PTBP2Q9UKA9 531 aaKnown RBP13.83□□□□□ -0.2
VPS33B-208ENST00000574755 PSMD13Q9UNM6 376 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 GPR45Q9Y5Y3 372 aa13.83□□□□□ -0.2
VPS33B-208ENST00000574755 OR7A17O14581 309 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 KATNA1O75449 491 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 OTCP00480 354 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 CEBPBP17676 345 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 CAPN3P20807 821 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 PEX2P28328 305 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 TRIM25Q14258 630 aaKnown RBP13.82□□□□□ -0.2
VPS33B-208ENST00000574755 ANO7Q6IWH7 933 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 ZFP1Q6P2D0 407 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 BRAT1Q6PJG6 821 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 RETREG3Q86VR2 466 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 SPATA24Q86W54 205 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 OR4F6Q8NGB9 312 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 HERVK_113Q902F9 699 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 DLG3Q92796 817 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 HEPHQ9BQS7 1158 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 ELOVL2Q9NXB9 296 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 KCTD5Q9NXV2 234 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 WWOXQ9NZC7 414 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 NDUFAF1Q9Y375 327 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 ALPK3Q96L96 1907 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 PRORSD1PA6NEY8 169 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 TTC34A8MYJ7 566 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 WASH3PC4AMC7 463 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 LEFTY1O75610 366 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 IRX1P78414 480 aaPredicted RBP13.82□□□□□ -0.2
VPS33B-208ENST00000574755 B4GALNT1Q00973 533 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 KLC1Q07866 573 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 ATP6AP1LQ52LC2 224 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 IL27RAQ6UWB1 636 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 PQLC1Q8N2U9 271 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 FNDC5Q8NAU1 212 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 ULK4Q96C45 1275 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 C1orf50Q9BV19 199 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 SPATA16Q9BXB7 569 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 KLHL4Q9C0H6 718 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 PCDHAC1Q9H158 963 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 IL1RL2Q9HB29 575 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 AIG1Q9NVV5 245 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 PKD2L2Q9NZM6 624 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 C6orf203Q9P0P8 240 aaPredicted RBP13.82□□□□□ -0.2
VPS33B-208ENST00000574755 MRPS23Q9Y3D9 190 aaKnown RBP13.82□□□□□ -0.2
VPS33B-208ENST00000574755 ANGPTL3Q9Y5C1 460 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 CHD9Q3L8U1 2897 aa13.82□□□□□ -0.2
VPS33B-208ENST00000574755 ZNF197O14709 1029 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 TAPBPO15533 448 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 OR56A5P0C7T3 313 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 GDF5P43026 501 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 SLC7A2P52569 658 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 ERVK-8P63133 956 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 CRY1Q16526 586 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 MAP7D1Q3KQU3 841 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 SAMD4BQ5PRF9 694 aaKnown RBP13.81□□□□□ -0.2
VPS33B-208ENST00000574755 C8orf82Q6P1X6 216 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-208ENST00000574755 DET1Q7L5Y6 550 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 RBM23Q86U06 439 aaKnown RBP13.81□□□□□ -0.2
VPS33B-208ENST00000574755 SLC45A3Q96JT2 553 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 HBEGFQ99075 208 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 SLC2A11Q9BYW1 496 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 MARK1Q9P0L2 795 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 TMEM181Q9P2C4 612 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 MAP10Q9P2G4 905 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 OPTCQ9UBM4 332 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 SLC8A2Q9UPR5 921 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 SLC9A3R1O14745 358 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-208ENST00000574755 CBSLP0DN79 551 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 HSPA8P11142 646 aaKnown RBP13.81□□□□□ -0.2
VPS33B-208ENST00000574755 MYOGP15173 224 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 ZNF30P17039 623 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 SYN1P17600 705 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 AKT1P31749 480 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 CCR7P32248 378 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 CBSP35520 551 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 KCNK10P57789 538 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 BLMHQ13867 455 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 ARSIQ5FYB1 569 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 C6orf136Q5SQH8 315 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 SULT1C3Q6IMI6 304 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 BLOC1S3Q6QNY0 202 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 MILR1Q7Z6M3 343 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 KIAA0907Q7Z7F0 614 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-208ENST00000574755 PLPP6Q8IY26 295 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 FRS2Q8WU20 508 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 RHBDF1Q96CC6 855 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 LRCH3Q96II8 777 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 MRGPRX3Q96LB0 322 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 CD244Q9BZW8 370 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms