RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ZNHIT2Q9UHR6 403 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 MOSPD1Q9UJG1 213 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 FAM86C2PA6NEL3 165 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 TM9SF1O15321 606 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 GRID2O43424 1007 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 GPR37L1O60883 481 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 POP7O75817 140 aaKnown RBP23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 RABIFP47224 123 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 THOP1P52888 689 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 SLC18A1P54219 525 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 YPEL5P62699 121 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 GUCY1A3Q02108 690 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 SEPT7Q16181 437 aaKnown RBP23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 TTLL9Q3SXZ7 439 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 AGAP9Q5VTM2 703 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 C11orf96Q7Z7L8 435 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 LILRA3Q8N6C8 439 aaPredicted RBP23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 SCYL1Q96KG9 808 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 WDR92Q96MX6 357 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 FAM126AQ9BYI3 521 aaPredicted RBP23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 MIR1-1HGQ9H1L0 117 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 GULP1Q9UBP9 304 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 GPR89AB7ZAQ6 455 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 ZBTB14O43829 449 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 GPR89BP0CG08 455 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 CD1DP15813 335 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 HTR1BP28222 390 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 AVPR2P30518 371 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 MDH1P40925 334 aaKnown RBP23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 TSNAXIP1Q2TAA8 658 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 SYTL3Q4VX76 610 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 LRRC8EQ6NSJ5 796 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 ENPP7Q6UWV6 458 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 PIWIL4Q7Z3Z4 852 aaKnown RBP23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 LCA5Q86VQ0 697 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 SLC22A18ASQ8N1D0 253 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 ARMC2Q8NEN0 867 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 OR56A4Q8NGH8 313 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 DERL2Q9GZP9 239 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 DUSP15Q9H1R2 295 aaPredicted RBP23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 NMRAL1Q9HBL8 299 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 KLHL42Q9P2K6 505 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 FBXO4Q9UKT5 387 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 IKZF3Q9UKT9 509 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 SUFUQ9UMX1 484 aa23.62■■□□□ 1.37
ATPAF1-213ENST00000574428 APOA4P06727 396 aa23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 DGKAP23743 735 aa23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 WDR4P57081 412 aaKnown RBP23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 ZNF658BQ4V348 819 aaPredicted RBP23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 LVRNQ6Q4G3 990 aa23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 LAYNQ6UX15 382 aa23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 VRK3Q8IV63 474 aa23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 FSTL5Q8N475 847 aaPredicted RBP23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 OR1E3Q8WZA6 343 aa23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 PDXPQ96GD0 296 aa23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 LINC00615Q96LM1 132 aaPredicted RBP23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 PAIP2Q9BPZ3 127 aaKnown RBP23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 SLC23A2Q9UGH3 650 aa23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 ABCA7Q8IZY2 2146 aa23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 CEP192Q8TEP8 1941 aa23.61■■□□□ 1.37
ATPAF1-213ENST00000574428 PRSS38A1L453 326 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 SCAMP1O15126 338 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 KPNA5O15131 536 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 PLIN3O60664 434 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 PROCP04070 461 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 THEGLP0DJG4 465 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 TFEBP19484 476 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 KELP23276 732 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 ETV4P43268 484 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 PREPP48147 710 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 RGS4P49798 205 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 DMTNQ08495 405 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 TUBB8Q3ZCM7 444 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 PLEKHS1Q5SXH7 462 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 KLC3Q6P597 504 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 LPCAT2Q7L5N7 544 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 CCDC63Q8NA47 563 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 ASZ1Q8WWH4 475 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 GAB3Q8WWW8 586 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 PTERQ96BW5 349 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 ALG9Q9H6U8 611 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 RMI1Q9H9A7 625 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 CYP4F12Q9HCS2 524 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 CPSF2Q9P2I0 782 aaKnown RBP23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 CDYLQ9Y232 598 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 NPEPPSL1A6NEC2 478 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 TK2O00142 265 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 TOR1BO14657 336 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 KMOO15229 486 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 GNPDA1P46926 289 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 GBX1Q14549 363 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 GALNT13Q8IUC8 556 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 CFAP206Q8IYR0 622 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 OR2L2Q8NH16 312 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 XPR1Q9UBH6 696 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 PNMA8BQ9ULN7 279 aaPredicted RBP23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 DNAJC16Q9Y2G8 782 aa23.6■■□□□ 1.37
ATPAF1-213ENST00000574428 CDC7O00311 574 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 BTN3A1O00481 513 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 KPNA2P52292 529 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms