RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 OLIG2Q13516 323 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 PRPSAP1Q14558 356 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 ATP1A1-AS1Q5TC04 95 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 KLHL35Q6PF15 583 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 NAT14Q8WUY8 206 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 KLHL6Q8WZ60 621 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 OSBPL8Q9BZF1 889 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 FKBPLQ9UIM3 349 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 CROTQ9UKG9 612 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 PCDHA3Q9Y5H8 950 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 CFAP20Q9Y6A4 193 aaKnown RBP20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 DNMT3AQ9Y6K1 912 aaPredicted RBP20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 HECTD1Q9ULT8 2610 aa20.69■□□□□ 0.9
CHRNB1-206ENST00000574054 RCCD1A6NED2 376 aa20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 TERTO14746 1132 aaKnown RBP20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 KCNN4O15554 427 aa20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 IPO7O95373 1038 aaKnown RBP20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 DLSTP36957 453 aa20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 CSRP3P50461 194 aa20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 TAF1AQ15573 450 aaPredicted RBP20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 ANKRD20A2Q5SQ80 823 aa20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 ANKRD20A1Q5TYW2 823 aa20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 ANKRD20A3Q5VUR7 823 aa20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 DARS2Q6PI48 645 aaKnown RBP20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 ZNF514Q96K75 400 aaPredicted RBP20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 WWP1Q9H0M0 922 aa20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 ASB8Q9H765 288 aa20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 KCTD3Q9Y597 815 aa20.68■□□□□ 0.9
CHRNB1-206ENST00000574054 ZNF106Q9H2Y7 1883 aaKnown RBP20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 IGHV5-51A0A0C4DH38 117 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 RBP3P10745 1247 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 MTHFD1P11586 935 aaKnown RBP20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 NELFEP18615 380 aaKnown RBP20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 F8A1P23610 371 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 ARL4DP49703 201 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 METRNLQ641Q3 311 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 DUS1LQ6P1R4 473 aaKnown RBP20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 PPP1R3BQ86XI6 285 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 SIDT2Q8NBJ9 832 aaKnown RBP20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 CCDC110Q8TBZ0 833 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 APOBEC4Q8WW27 367 aaKnown RBP20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 DCUN1D1Q96GG9 259 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 C12orf66Q96MD2 445 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 PANX2Q96RD6 677 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 RAB33BQ9H082 229 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 PDE7BQ9NP56 450 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 TUBD1Q9UJT1 453 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 EFR3BQ9Y2G0 817 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 AAR2Q9Y312 384 aaKnown RBP20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 EPN1Q9Y6I3 576 aaPredicted RBP20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 DUSP10Q9Y6W6 482 aa20.67■□□□□ 0.9
CHRNB1-206ENST00000574054 CCDC66A2RUB6 948 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 C5orf60A6NFR6 353 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 MGAT4DA6NG13 374 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 KATNA1O75449 491 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 SPAG6O75602 509 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 SRP72O76094 671 aaKnown RBP20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 FGF5P12034 268 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 ADRA1AP35348 466 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 CETN2P41208 172 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 RWDD2BP57060 319 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 TMPRSS15P98073 1019 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 TUBB3Q13509 450 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 KCNAB1Q14722 419 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 DNTTIP2Q5QJE6 756 aaKnown RBP20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 CYB5D1Q6P9G0 228 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 RANBP10Q6VN20 620 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 C9orf43Q8TAL5 461 aaPredicted RBP20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 UBXN4Q92575 508 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 CALR3Q96L12 384 aaKnown RBP20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 ZNF71Q9NQZ8 489 aaPredicted RBP20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 CRLS1Q9UJA2 301 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 PCDHB3Q9Y5E6 796 aa20.66■□□□□ 0.9
CHRNB1-206ENST00000574054 CRTAMO95727 393 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 SLC35G4P0C7Q5 338 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 CCNYL3P0C7X3 344 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 PTPN7P35236 360 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 ZNF75DP51815 510 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 AADACL2Q6P093 401 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 TMTC1Q8IUR5 882 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 OR13C4Q8NGS5 318 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 OR2L2Q8NH16 312 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 SPATA13Q96N96 652 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 INSM2Q96T92 566 aaPredicted RBP20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 MAP3K3Q99759 626 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 TBL1YQ9BQ87 522 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 RARRES3Q9UL19 164 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 ACSL5Q9ULC5 683 aa20.65■□□□□ 0.9
CHRNB1-206ENST00000574054 COL12A1Q99715 3063 aa20.64■□□□□ 0.9
CHRNB1-206ENST00000574054 FLNCQ14315 2725 aa20.64■□□□□ 0.9
CHRNB1-206ENST00000574054 UBA6A0AVT1 1052 aaPredicted RBP20.64■□□□□ 0.89
CHRNB1-206ENST00000574054 TJP3O95049 919 aa20.64■□□□□ 0.89
CHRNB1-206ENST00000574054 TIAF1O95411 115 aa20.64■□□□□ 0.89
CHRNB1-206ENST00000574054 PTMAP06454 111 aaKnown RBP20.64■□□□□ 0.89
CHRNB1-206ENST00000574054 POLBP06746 335 aa20.64■□□□□ 0.89
CHRNB1-206ENST00000574054 EBLN1P0CF75 366 aa20.64■□□□□ 0.89
CHRNB1-206ENST00000574054 RALBP11234 206 aa20.64■□□□□ 0.89
CHRNB1-206ENST00000574054 FOLR1P15328 257 aa20.64■□□□□ 0.89
CHRNB1-206ENST00000574054 PDE1BQ01064 536 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms